> Synaptotagmin XVII (SYT17)
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UGID:171531     UniGene Hs.258326     Homo sapiens (human)   SYT17 Order cDNA clone, Links
Synaptotagmin XVII (SYT17)

Human protein-coding gene SYT17. Represented by 112 ESTs from 69 cDNA libraries. Corresponds to reference sequence NM_016524.2. [UniGene 171531 - Hs.258326]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_057608.2 SYT17 gene product H. sapiens 100.0 473
NP_619590.1 Syt17 gene product M. musculus 97.5 469
XP_001922508.3 PREDICTED: synaptotagmin-17-like D. rerio 81.1 469
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003916654.1 PREDICTED: synaptotagmin-17 P. anubis 99.4 473
XP_001082835.2 PREDICTED: synaptotagmin-17 M. mulatta 99.2 473

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; cervix; pancreas; lung; uncharacterized tissue; kidney; uterus; stomach; intestine; embryonic tissue; mammary gland; muscle; placenta; mouth; thyroid; blood; tonsil; salivary gland; eye; lymph node; mixed; pituitary gland; ovary; parathyroid; nerve; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.3
UniSTS entry: Chr 16 RH93571
UniSTS entry: Chr 16 RH64994
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AF220560.1 Homo sapiens B/K protein mRNA, complete cds PA
NM_016524.2 Homo sapiens synaptotagmin XVII (SYT17), mRNA P
AK226136.1 Homo sapiens mRNA for B/K protein variant, clone: fh20774 PA
BC004518.2 Homo sapiens synaptotagmin XVII, mRNA (cDNA clone MGC:11229 IMAGE:3938134), complete cds PA
AK098747.1 Homo sapiens cDNA FLJ25881 fis, clone CBR02602, highly similar to Homo sapiens B/K protein mRNA P
AK296000.1 Homo sapiens cDNA FLJ56448 complete cds, highly similar to Homo sapiens synaptotagmin XVII (SYT17), mRNA P

EST sequences (10 of 112) [Show all sequences]

AI033562.1 Clone IMAGE:1655831 mixed 3' read
AI140528.1 Clone IMAGE:1652776 mixed 3' read
BX106395.1 Clone IMAGp998O01287_;_IMAGE:52226 brain PA
BX088745.1 Clone IMAGp998B063119_;_IMAGE:1239845 parathyroid
AI198391.1 Clone IMAGE:1861103 brain 3' read A
AI287698.1 Clone IMAGE:1964576 ovary 3' read
AI363311.1 Clone IMAGE:2016112 brain 3' read P
R53046.1 Clone IMAGE:40321 brain 3' read A
AI914047.1 Clone IMAGE:2337328 lung 3' read
Z41994.1 Clone c-05c02 brain


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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