> Tumor necrosis factor receptor superfamily, member 17 (TNFRSF17)
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UGID:131261     UniGene Hs.2556     Homo sapiens (human)   TNFRSF17 Order cDNA clone, Links
Tumor necrosis factor receptor superfamily, member 17 (TNFRSF17)

Human protein-coding gene TNFRSF17. Represented by 23 ESTs from 14 cDNA libraries. Corresponds to reference sequence NM_001192.2. [UniGene 131261 - Hs.2556]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_523298.2 PREDICTED: tumor necrosis factor receptor superfamily member 17 isoform 2 P. troglodytes 100.0 183
NP_001183.2 TNFRSF17 gene product H. sapiens 100.0 183
NP_035738.1 Tnfrsf17 gene product M. musculus 63.8 184
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_003916609.1 PREDICTED: tumor necrosis factor receptor superfamily member 17 P. anubis 94.0 184
XP_001106892.1 PREDICTED: tumor necrosis factor receptor superfamily member 17 isoform 2 M. mulatta 92.9 182

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lymph node; pharynx; mixed; lung; eye; connective tissue; testis; uncharacterized tissue; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.1
UniSTS entry: Chr 16 RH70979
UniSTS entry: Chr 16 D16S3207 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC058291.1 Homo sapiens tumor necrosis factor receptor superfamily, member 17, mRNA (cDNA clone MGC:61811 IMAGE:6736094), complete cds PA
NM_001192.2 Homo sapiens tumor necrosis factor receptor superfamily, member 17 (TNFRSF17), mRNA P
AY684975.1 Homo sapiens tumor necrosis factor receptor superfamily member 17 (TNFRSF17) mRNA, complete cds; alternatively spliced P
EF152356.1 Homo sapiens B cell maturation antigen transcript variant 5 (BCMA) mRNA, partial cds, alternatively spliced P
EF152355.1 Homo sapiens B cell maturation antigen transcript variant 4 (BCMA) mRNA, complete cds, alternatively spliced P
EF152354.1 Homo sapiens B cell maturation antigen transcript variant 3 (BCMA) mRNA, complete cds, alternatively spliced P
EF152353.1 Homo sapiens B cell maturation antigen transcript variant 2 (BCMA) mRNA, complete cds, alternatively spliced P
Z14954.1 H.sapiens BCM mRNA P
Z29575.1 H.sapiens mRNA for BCMA peptide P

EST sequences (10 of 23) [Show all sequences]

AA987627.1 Clone IMAGE:1603393 lung 3' read A
BX097511.1 Clone IMAGp998M215993_;_IMAGE:2412092 lymph node PA
AI865358.1 Clone IMAGE:2412092 lymph node 3' read A
CB958828.1 Clone IMAGE:30352651 mixed 5' read P
CD685741.1 pharynx P
CD685587.1 pharynx P
CD693527.1 pharynx P
CD702387.1 pharynx P
AW139591.1 Clone IMAGE:2718852 mixed 3' read PA
BP428758.1 Clone LEU0405_13_B5 P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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