> Protein tyrosine phosphatase, non-receptor type 23 (PTPN23)
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UGID:135053     UniGene Hs.25524     Homo sapiens (human)   PTPN23 Order cDNA clone, Links
Protein tyrosine phosphatase, non-receptor type 23 (PTPN23)

Human protein-coding gene PTPN23. Represented by 282 ESTs from 153 cDNA libraries. Corresponds to reference sequence NM_015466.2. [UniGene 135053 - Hs.25524]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056281.1 PTPN23 gene product H. sapiens 100.0 1635
XP_003950151.1 PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 23 P. troglodytes 99.6 1682
NP_001074512.1 tyrosine-protein phosphatase non-receptor type 23 M. musculus 95.1 1691
NP_001038393.1 protein tyrosine phosphatase-like D. rerio 63.1 1186
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_003894552.1 PREDICTED: tyrosine-protein phosphatase non-receptor type 23 isoform 1 P. anubis 99.1 1631
XP_001100428.2 PREDICTED: tyrosine-protein phosphatase non-receptor type 23-like isoform 1 M. mulatta 98.9 1505

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; uncharacterized tissue; intestine; eye; pancreas; mixed; bone marrow; lung; ovary; embryonic tissue; kidney; placenta; adrenal gland; mouth; blood; heart; thymus; trachea; larynx; bladder; thyroid; liver; uterus; lymph node; stomach; tonsil; mammary gland; ascites; lymph; testis; salivary gland; prostate; connective tissue; cervix; nerve; vascular; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p21.3
UniSTS entry: Chr 3 RH91891
UniSTS entry: RH93462
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AL110210.1 Homo sapiens mRNA; cDNA DKFZp564F0923 (from clone DKFZp564F0923); partial cds PA
BT009758.1 Homo sapiens protein tyrosine phosphatase, non-receptor type 23 mRNA, complete cds P
BC089042.1 Homo sapiens protein tyrosine phosphatase, non-receptor type 23, mRNA (cDNA clone MGC:99484 IMAGE:6579163), complete cds PA
AB025194.1 Homo sapiens mRNA for protein tyrosine phosphatase HD-PTP, complete cds PA
AF290614.1 Homo sapiens clone F2896 protein tyrosine phosphatase TD14 mRNA, complete cds PA
BC004881.2 Homo sapiens protein tyrosine phosphatase, non-receptor type 23, mRNA (cDNA clone IMAGE:3831058), partial cds PA
AK055157.1 Homo sapiens cDNA FLJ30595 fis, clone BRAWH2008956, highly similar to Protein-tyrosine-phosphatase (EC 3.1.3.48) P
AK289502.1 Homo sapiens cDNA FLJ75567 complete cds, highly similar to Homo sapiens protein tyrosine phosphatase, non-receptor type 23 (PTPN23), mRNA P
BC027711.2 Homo sapiens protein tyrosine phosphatase, non-receptor type 23, mRNA (cDNA clone IMAGE:4111514), partial cds PA
AK299906.1 Homo sapiens cDNA FLJ58078 complete cds, highly similar to Tyrosine-protein phosphatase non-receptortype 23 (EC 3.1.3.48) PA
AK295888.1 Homo sapiens cDNA FLJ53444 complete cds, highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48) PA
AK295877.1 Homo sapiens cDNA FLJ58355 complete cds, highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48) PA
AB040904.2 Homo sapiens mRNA for KIAA1471 protein, partial cds P
BC020380.1 Homo sapiens protein tyrosine phosphatase, non-receptor type 23, mRNA (cDNA clone IMAGE:4154022) P
AF169350.1 Homo sapiens protein tyrosine phosphatase TD14 (PTP-TD14) mRNA, partial cds P
NM_015466.2 Homo sapiens protein tyrosine phosphatase, non-receptor type 23 (PTPN23), mRNA PA

EST sequences (10 of 282) [Show all sequences]

AA975710.1 Clone IMAGE:1589017 kidney 3' read A
AA994453.1 Clone IMAGE:1628515 mixed 3' read A
AI001000.1 Clone IMAGE:1608442 mammary gland 3' read
AA927200.1 Clone IMAGE:1540454 mixed 3' read
R21426.1 Clone IMAGE:130122 placenta 5' read
R21427.1 Clone IMAGE:130122 placenta 3' read
AI138566.1 Clone IMAGE:1736246 testis 3' read A
AI150122.1 Clone IMAGE:1752910 testis 3' read A
BX099063.1 Clone IMAGp998N084329_;_IMAGE:1704775 brain
BX105256.1 Clone IMAGp998O211857_;_IMAGE:755564 ovary P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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