Neuroepithelial cell transforming 1 (NET1)

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UGID:134980 UniGene Hs.25155 Homo sapiens (human) NET1

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Neuroepithelial cell transforming 1 (NET1)

Human protein-coding gene NET1. Represented by 841 ESTs from 273 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 134980 - Hs.25155]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001040625.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	NET1 gene product	H. sapiens	100.0	595
XP_507633.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: neuroepithelial cell-transforming gene 1 protein isoform 4	P. troglodytes	99.8	595
NP_062645.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Net1 gene product	M. musculus	93.8	594
NP_001007768.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	net1 gene product	D. rerio	81.7	550
NP_001080375.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	neuroepithelial cell-transforming gene 1 protein	X. laevis	80.7	579
Other hits (2 of 25) [Show all]		Species	Id(%)	Len(aa)
XP_003903401.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: neuroepithelial cell-transforming gene 1 protein	P. anubis	99.0	513
XP_002805593.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: neuroepithelial cell-transforming gene 1 protein-like	M. mulatta	98.7	537

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; trachea; placenta; testis; mouth; ascites; embryonic tissue; prostate; uterus; thymus; liver; kidney; ear; mixed; salivary gland; uncharacterized tissue; muscle; lung; bone marrow; intestine; eye; bladder; esophagus; ovary; skin; heart; connective tissue; thyroid; cervix; amniotic fluid; stomach; pancreas; mammary gland; blood; vascular; larynx; lymph node; pharynx; bone; ganglia; nerve

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	10
Map position:	10p15
UniSTS entry:	Chr 10	D10S2144
UniSTS entry:	Chr 10	G20525
UniSTS entry:	Chr 10	A005V03	[Map Viewer]
UniSTS entry:	Chr 10	STS-U02081	[Map Viewer]
UniSTS entry:	Chr 10	A004R05
UniSTS entry:	Chr 10	G30942
UniSTS entry:	Chr 10	NET1
UniSTS entry:	Chr 20	RH11545

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AJ010046.1	Homo sapiens mRNA for Rho guanine nucleotide-exchange factor, splice variant NET1A	P
BC053553.1	Homo sapiens neuroepithelial cell transforming 1, mRNA (cDNA clone MGC:61640 IMAGE:6137683), complete cds	PA
NM_005863.4	Homo sapiens neuroepithelial cell transforming 1 (NET1), transcript variant 2, mRNA	P
AB209852.1	Homo sapiens premature mRNA for neuroepithelial cell transforming gene 1 protein variant	P
AK024919.1	Homo sapiens cDNA: FLJ21266 fis, clone COL01684, highly similar to HS010046 Homo sapiens mRNA for Rho guanine nucleotide-exchange factor	PA
NM_001047160.2	Homo sapiens neuroepithelial cell transforming 1 (NET1), transcript variant 1, mRNA	P
BC010285.1	Homo sapiens neuroepithelial cell transforming 1, mRNA (cDNA clone MGC:5367 IMAGE:3048980), complete cds	PA
AK315566.1	Homo sapiens cDNA, FLJ96638, Homo sapiens neuroepithelial cell transforming gene 1 (NET1), mRNA	P
AK294244.1	Homo sapiens cDNA FLJ54782 complete cds, highly similar to Neuroepithelial cell-transforming gene 1protein	P
AK299335.1	Homo sapiens cDNA FLJ50843 complete cds, highly similar to Neuroepithelial cell-transforming gene 1 protein	P
AK304028.1	Homo sapiens cDNA FLJ53956 complete cds, highly similar to Neuroepithelial cell-transforming gene 1 protein	P
AK302687.1	Homo sapiens cDNA FLJ50300 complete cds, highly similar to Neuroepithelial cell-transforming gene 1protein	P
S82401.1	NET1=neuroepithelioma transforming gene 1 [human, immortalized mammary epithelial cell line, B5/589, mRNA Partial, 460 nt]	P
NR_073040.1	Homo sapiens neuroepithelial cell transforming 1 (NET1), transcript variant 3, non-coding RNA	P
U02081.1	Human guanine nucleotide regulatory protein (NET1) mRNA, complete cds	P

EST sequences (10 of 841) [Show all sequences]

AA961758.1	Clone IMAGE:1600254	uncharacterized tissue	3' read	A
AA970183.1	Clone IMAGE:1581265	mixed	3' read	A
AA970270.1	Clone IMAGE:1575195	kidney	3' read	A
AA887415.1	Clone IMAGE:1501706	kidney	3' read	A
AI014804.1	Clone IMAGE:1623042	embryonic tissue	3' read	P
AI017100.1	Clone IMAGE:1627935	mixed	3' read	A
AI033375.1	Clone IMAGE:1655223	mixed	3' read	A
AI039459.1	Clone IMAGE:1658453	embryonic tissue	3' read	A
AI061353.1	Clone IMAGE:1700801	kidney	3' read	A
AI077881.1	Clone IMAGE:1665550	skin	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria