> Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 (CHST4)
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UGID:169810     UniGene Hs.251383     Homo sapiens (human)   CHST4 Order cDNA clone, Links
Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 (CHST4)

Human protein-coding gene CHST4. Represented by 28 ESTs from 16 cDNA libraries. EST representation biased toward bladder; blastocyst. Corresponds to 2 reference sequences (different isoforms). [UniGene 169810 - Hs.251383]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001159867.1 CHST4 gene product H. sapiens 100.0 385
NP_036128.3 Chst4 gene product M. musculus 75.3 387
NP_001124093.1 zgc:194879 gene product D. rerio 57.3 370
NP_001086002.1 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 X. laevis 57.2 362
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_523411.2 PREDICTED: carbohydrate sulfotransferase 4 isoform 3 P. troglodytes 99.5 385
XP_001106318.1 PREDICTED: carbohydrate sulfotransferase 4-like isoform 2 M. mulatta 95.6 387

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: bladder [show more like this]
blastocyst [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; bladder; uncharacterized tissue; intestine; brain; connective tissue; testis; lung; muscle; trachea; pancreas; embryonic tissue; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q22.2
UniSTS entry: Chr 16 CHST4_9
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_005769.2 Homo sapiens carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 (CHST4), transcript variant 1, mRNA PA
AF131235.1 Homo sapiens N-acetylglucosamine 6-O-sulfotransferase mRNA, complete cds PA
AK026635.1 Homo sapiens cDNA: FLJ22982 fis, clone KAT11454, highly similar to AF131235 Homo sapiens N-acetylglucosamine 6-O-sulfotransferase mRNA PA
AF280088.1 Homo sapiens L-selectin ligand sulfotransferase GST-3 mRNA, complete cds PA
AF149783.1 Homo sapiens L-selectin ligand sulfotransferase mRNA, complete cds P
AK074746.1 Homo sapiens cDNA FLJ90265 fis, clone NT2RM4001325, highly similar to Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 P
NM_001166395.1 Homo sapiens carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 (CHST4), transcript variant 2, mRNA PA
BC035282.1 Homo sapiens carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4, mRNA (cDNA clone MGC:34456 IMAGE:5179826), complete cds PA

EST sequences (10 of 28) [Show all sequences]

AW002418.1 Clone IMAGE:2524564 uncharacterized tissue 3' read
BX490456.1 Clone DKFZp686G0680 muscle 5' read P
AW572390.1 Clone IMAGE:2799634 intestine 3' read A
AW572510.1 Clone IMAGE:2751044 uterus 3' read
CN407344.1 embryonic tissue 5' read P
CN407345.1 embryonic tissue 5' read P
CV029589.1 mixed 5' read P
DA045171.1 Clone BLADE2007587 bladder 5' read P
DA045390.1 Clone BLADE2007874 bladder 5' read P
DA045415.1 Clone BLADE2007904 bladder 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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