> Ring finger protein 168, E3 ubiquitin protein ligase (RNF168)
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UGID:169720     UniGene Hs.250648     Homo sapiens (human)   RNF168 Order cDNA clone, Links
Ring finger protein 168, E3 ubiquitin protein ligase (RNF168)

Human protein-coding gene RNF168. Represented by 158 ESTs from 98 cDNA libraries. Corresponds to reference sequence NM_152617.3. [UniGene 169720 - Hs.250648]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689830.2 RNF168 gene product H. sapiens 100.0 570
NP_081631.2 Rnf168 gene product M. musculus 73.4 566
NP_001085123.1 E3 ubiquitin-protein ligase RNF168 X. laevis 59.2 289
NP_956149.1 rnf168 gene product D. rerio 54.1 209
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001164756.1 PREDICTED: E3 ubiquitin-protein ligase RNF168 P. troglodytes 99.3 570
XP_003895384.1 PREDICTED: E3 ubiquitin-protein ligase RNF168 P. anubis 89.2 565

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; embryonic tissue; intestine; uterus; ovary; mammary gland; ear; kidney; bone marrow; testis; prostate; stomach; lymph node; skin; placenta; uncharacterized tissue; lung; liver; bladder; mouth; thymus; mixed; thyroid; heart; esophagus; salivary gland; pharynx; larynx; tonsil; blood; cervix; ascites; muscle; nerve; ganglia; bone; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q29
UniSTS entry: Chr 3 RH101981
UniSTS entry: Chr 1 STS-T76997
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC047483.1 Homo sapiens cDNA clone IMAGE:5286726 A
BC029433.1 Homo sapiens, clone IMAGE:4284850, mRNA A
AK097068.1 Homo sapiens cDNA FLJ39749 fis, clone SMINT2017599
AK093113.1 Homo sapiens cDNA FLJ35794 fis, clone TESTI2005788 P
BC033791.1 Homo sapiens ring finger protein 168, mRNA (cDNA clone MGC:45398 IMAGE:5163887), complete cds PA
NM_152617.3 Homo sapiens ring finger protein 168, E3 ubiquitin protein ligase (RNF168), mRNA PA
AK054732.1 Homo sapiens cDNA FLJ30170 fis, clone BRACE2000885, weakly similar to CALDESMON P

EST sequences (10 of 158) [Show all sequences]

R14464.1 Clone IMAGE:29050 brain 5' read
AI024546.1 Clone IMAGE:1639629 testis 3' read A
R22411.1 Clone IMAGE:130539 placenta 3' read A
R22458.1 Clone IMAGE:130539 placenta 5' read
BX112466.1 Clone IMAGp998C05187_;_IMAGE:133180 placenta
R25398.1 Clone IMAGE:133180 placenta 3' read A
R28424.1 Clone IMAGE:133180 placenta 5' read
CB155364.1 Clone B2N807043-5-H06 brain 5' read
CB122206.1 Clone L10ChoCK0-15-D09 liver 5' read
T25902.1 thymus


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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