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UGID:169047     UniGene Hs.248136     Homo sapiens (human)   HTR1F
5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled (HTR1F)

Human protein-coding gene HTR1F. Represented by 10 ESTs from 4 cDNA libraries. Corresponds to reference sequence NM_000866.3. [UniGene 169047 - Hs.248136]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001182198.1 5-hydroxytryptamine receptor 1F P. troglodytes 100.0 365
NP_000857.1 5-hydroxytryptamine receptor 1F H. sapiens 100.0 365
NP_032336.1 5-hydroxytryptamine receptor 1F M. musculus 95.6 365
XP_001344430.1 PREDICTED: 5-hydroxytryptamine receptor 1F D. rerio 67.2 338
NP_001079299.1 5-hydroxytryptamine receptor 1A X. laevis 49.5 198
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_003893858.1 PREDICTED: 5-hydroxytryptamine receptor 1F P. anubis 98.4 365
XP_001081998.1 PREDICTED: 5-hydroxytryptamine receptor 1F-like M. mulatta 98.1 365

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; pancreas; bone marrow; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p12
UniSTS entry: Chr 3 HTR1F
UniSTS entry: Chr 3 RH46950 [Map Viewer]
UniSTS entry: Chr 3 RH68987 [Map Viewer]
UniSTS entry: Chr 3 HTR1F_996
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC069125.1 Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1F, mRNA (cDNA clone MGC:95405 IMAGE:7216980), complete cds P
BC096838.1 Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1F, mRNA (cDNA clone IMAGE:6519216), containing frame-shift errors P
NM_000866.3 Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled (HTR1F), mRNA P
AF498981.1 Homo sapiens 5-hydroxytryptamine receptor 1F (HTR1F) mRNA, complete cds P

EST sequences (10)

CB565886.1 Clone IMAGE:6519216 uncharacterized tissue 5' read P
BX327154.2 Clone CS0DI032YB14 placenta 5' read P
BX329042.2 Clone CS0DI032YB14 placenta 3' read P
BX357988.2 Clone CS0DI032YB14 placenta 5' read P
BX364935.2 Clone CS0DI032YB14 placenta 5' read P
AV758122.1 Clone BMFBEG01 bone marrow 5' read
BM312885.1 pancreas 3' read
BM313179.1 pancreas 5' read
CA942616.1 Clone IMAGE:6607417 pancreas 3' read
CA942859.1 Clone IMAGE:6607417 pancreas 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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