> CD48 molecule (CD48)
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UGID:168280     UniGene Hs.243564     Homo sapiens (human)   CD48 Order cDNA clone, Links
CD48 molecule (CD48)

Human protein-coding gene CD48. Represented by 127 ESTs from 70 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 168280 - Hs.243564]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001242959.1 CD48 gene product H. sapiens 100.0 251
NP_031675.1 Cd48 gene product M. musculus 55.4 239
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_001172145.2 PREDICTED: CD48 antigen isoform 3 P. troglodytes 99.2 242
XP_003892983.1 PREDICTED: CD48 antigen P. anubis 93.7 239

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; blood; thymus; lymph; uncharacterized tissue; lymph node; brain; skin; lung; vascular; prostate; placenta; muscle; pharynx; uterus; spleen; stomach; pancreas; mammary gland; testis; tonsil; eye; kidney; bone marrow; connective tissue; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21.3-q22
UniSTS entry: Chr 1 D1S2413
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

M37766.1 Human MEM-102 glycoprotein mRNA, complete cds P
NM_001778.3 Homo sapiens CD48 molecule (CD48), transcript variant 1, mRNA PA
CR457012.1 Homo sapiens full open reading frame cDNA clone RZPDo834G095D for gene CD48, CD48 antigen (B-cell membrane protein); complete cds, incl. stopcodon P
BT019813.1 Homo sapiens CD48 antigen (B-cell membrane protein) mRNA, complete cds P
AK225636.1 Homo sapiens mRNA for CD48 antigen variant, clone: SPL08742 PA
M59904.1 Human pan-leukocyte antigen (CD48) mRNA, complete cds PA
X06341.1 Human mRNA for lymphocte activation marker Blast-1 P
BC016182.1 Homo sapiens CD48 molecule, mRNA (cDNA clone MGC:22996 IMAGE:4850933), complete cds PA
AK310744.1 Homo sapiens cDNA, FLJ17786 P
AK310624.1 Homo sapiens cDNA, FLJ17666 P
BC030224.1 Homo sapiens CD48 molecule, mRNA (cDNA clone MGC:34616 IMAGE:5223308), complete cds PA
NM_001256030.1 Homo sapiens CD48 molecule (CD48), transcript variant 2, mRNA PA

EST sequences (10 of 127) [Show all sequences]

AA903689.1 Clone IMAGE:1517820 uncharacterized tissue 3' read A
AA994239.1 Clone IMAGE:1625364 mixed 3' read
AI028034.1 Clone IMAGE:1671476 uncharacterized tissue 3' read A
AA928245.1 Clone IMAGE:1563651 mixed 3' read A
BX099014.1 Clone IMAGp998C23123_;_IMAGE:125134 mixed P
AI268271.1 Clone IMAGE:1880753 lung 3' read A
AI278430.1 Clone IMAGE:1892445 placenta 3' read A
AI244304.1 Clone IMAGE:1866360 kidney 3' read A
AI285676.1 Clone IMAGE:1968207 lymph node 3' read PA
AI372042.1 Clone IMAGE:2046113 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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