> Component of oligomeric golgi complex 5 (COG5)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:167785     UniGene Hs.239631     Homo sapiens (human)   COG5 Order cDNA clone, Links
Component of oligomeric golgi complex 5 (COG5)

Human protein-coding gene COG5. Represented by 417 ESTs from 203 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 167785 - Hs.239631]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_519305.2 PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform 4 P. troglodytes 100.0 859
NP_006339.3 COG5 gene product H. sapiens 100.0 859
NP_001156598.1 Cog5 gene product M. musculus 93.4 828
NP_001038609.1 conserved oligomeric Golgi complex subunit 5 D. rerio 83.2 803
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003896516.1 PREDICTED: conserved oligomeric Golgi complex subunit 5-like P. anubis 99.5 374
XP_001091524.2 PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform 1 M. mulatta 98.8 856

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; pharynx; spleen; esophagus; adrenal gland; mouth; ovary; thyroid; trachea; mixed; skin; uterus; embryonic tissue; heart; kidney; uncharacterized tissue; lung; blood; pancreas; eye; intestine; pituitary gland; mammary gland; lymph node; connective tissue; prostate; cervix; thymus; vascular; liver; placenta; adipose tissue; lymph; salivary gland; ascites; bone marrow; nerve; bone; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q31
UniSTS entry: Chr 7 G67880
UniSTS entry: Chr 7 STS-N63962
UniSTS entry: Chr 7 SGC34252 [Map Viewer]
UniSTS entry: Chr 7 RH16458 [Map Viewer]
UniSTS entry: Chr 7 WI-17975 [Map Viewer]
UniSTS entry: Chr 7 RH12237
UniSTS entry: Chr 7 WI-16200 [Map Viewer]
UniSTS entry: Chr 7 G73140
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AF058718.1 Homo sapiens putative 13 S Golgi transport complex 90kD subunit brain-specific isoform mRNA, complete cds P
NM_181733.2 Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 2, mRNA PA
AK126275.1 Homo sapiens cDNA FLJ44289 fis, clone TRACH2017609 A
AK123726.1 Homo sapiens cDNA FLJ41732 fis, clone HLUNG2017546 A
NM_006348.3 Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 1, mRNA PA
BC068540.1 Homo sapiens component of oligomeric golgi complex 5, mRNA (cDNA clone MGC:87389 IMAGE:4374289), complete cds PA
AK022835.1 Homo sapiens cDNA FLJ12773 fis, clone NT2RP2001660, highly similar to Conserved oligomeric Golgi complex component 5 P
AK314270.1 Homo sapiens cDNA, FLJ95023 P
NM_001161520.1 Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 3, mRNA PA

EST sequences (10 of 417) [Show all sequences]

R16170.1 Clone IMAGE:53376 brain 3' read
R15430.1 Clone IMAGE:53376 brain 5' read P
AA926962.1 Clone IMAGE:1552391 uncharacterized tissue 3' read A
AI089573.1 Clone IMAGE:1695521 uterus 3' read A
CB048175.1 Clone IMAGE:3270538 prostate 5' read
CB048174.1 Clone IMAGE:3270538 prostate 3' read A
CB053996.1 Clone IMAGE:3291402 brain 3' read A
AI167490.1 Clone IMAGE:1661492 mixed 3' read A
AI214237.1 Clone IMAGE:1925564 intestine 3' read A
AI219210.1 Clone IMAGE:1759388 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help