Potassium voltage-gated channel, subfamily F, member 1 (KCNF1)

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UGID:134724 UniGene Hs.23735 Homo sapiens (human) KCNF1

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Potassium voltage-gated channel, subfamily F, member 1 (KCNF1)

Human protein-coding gene KCNF1. Represented by 35 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_002236.4. [UniGene 134724 - Hs.23735]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001087665.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: potassium voltage-gated channel subfamily F member 1	M. mulatta	100.0	493
NP_002227.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	KCNF1 gene product	H. sapiens	100.0	493
XP_003908328.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: potassium voltage-gated channel subfamily F member 1	P. anubis	99.8	493
NP_963289.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	potassium voltage-gated channel subfamily F member 1	M. musculus	97.4	495
XP_002664235.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: potassium voltage-gated channel, subfamily F, member 1-like	D. rerio	77.5	466
NP_001097485.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	shaker cognate b, isoform K	D. melanogaster	54.9	164
NP_001079257.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	potassium voltage-gated channel, Shab-related subfamily, member 1	X. laevis	54.0	176
Other hits (2 of 33) [Show all]		Species	Id(%)	Len(aa)
XP_003354972.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: potassium voltage-gated channel subfamily F member 1	S. scrofa	98.8	399
NP_001162575.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	potassium voltage-gated channel, subfamily F, member 1	R. norvegicus	97.4	492

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; uncharacterized tissue; eye; pancreas; mixed; intestine

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2
Map position:	2p25
UniSTS entry:	Chr 2	RH78053
UniSTS entry:	Chr 2	RH79190
UniSTS entry:	Chr 2	D2S2129
UniSTS entry:	Chr 2	A005K01

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_002236.4	Homo sapiens potassium voltage-gated channel, subfamily F, member 1 (KCNF1), mRNA	PA
AF029780.1	Homo sapiens potassium channel mRNA, complete cds	PA
BC026110.2	Homo sapiens potassium voltage-gated channel, subfamily F, member 1, mRNA (cDNA clone MGC:33316 IMAGE:4797827), complete cds	PA
AF033382.1	Homo sapiens potassium channel mRNA, complete cds	P

EST sequences (10 of 35) [Show all sequences]

AA984726.1	Clone IMAGE:1630382	brain	3' read	P
R21482.1	Clone IMAGE:31369	brain	5' read
CB054271.1	Clone IMAGE:3291320	brain	3' read	PA
CB054272.1	Clone IMAGE:3291320	brain	5' read	P
BX113354.1	Clone IMAGp998J23160	brain	3' read	A
CB155571.1	Clone B2N807043-33-F12	brain	5' read	P
AI274992.1	Clone IMAGE:1877309	mixed	3' read
AI361583.1	Clone IMAGE:2015269	brain	3' read	A
AI566537.1	Clone IMAGE:2167366	brain	3' read	A
R45529.1	Clone IMAGE:35344	brain	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria