> Coiled-coil domain containing 9 (CCDC9)
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UGID:166112     UniGene Hs.227782     Homo sapiens (human)   CCDC9 Order cDNA clone, Links
Coiled-coil domain containing 9 (CCDC9)

Human protein-coding gene CCDC9. Represented by 62 ESTs from 39 cDNA libraries. Corresponds to reference sequence NM_015603.2. [UniGene 166112 - Hs.227782]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056418.1 CCDC9 gene product H. sapiens 100.0 530
XP_512778.3 PREDICTED: coiled-coil domain-containing protein 9 P. troglodytes 99.6 530
NP_758501.2 coiled-coil domain-containing protein 9 isoform 2 M. musculus 88.0 540
NP_001068574.1 zgc:152785 gene product D. rerio 61.2 335
NP_001088188.1 coiled-coil domain containing 9 X. laevis 59.2 375
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_001112863.1 PREDICTED: coiled-coil domain-containing protein 9 M. mulatta 98.3 528
XP_003915833.1 PREDICTED: coiled-coil domain-containing protein 9 P. anubis 98.1 528

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; vascular; mammary gland; thyroid; uncharacterized tissue; skin; larynx; testis; blood; pancreas; intestine; mixed; stomach; kidney; placenta; brain; prostate; bone; ascites; liver; spleen; ovary; lymph node; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.32
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AL050284.1 Homo sapiens mRNA; cDNA DKFZp586M1019 (from clone DKFZp586M1019) PA
NM_015603.2 Homo sapiens coiled-coil domain containing 9 (CCDC9), mRNA PA
BC002787.2 Homo sapiens coiled-coil domain containing 9, mRNA (cDNA clone MGC:3584 IMAGE:3615928), complete cds PA
BC009743.2 Homo sapiens coiled-coil domain containing 9, mRNA (cDNA clone MGC:10357 IMAGE:3832697), complete cds PA
AK302153.1 Homo sapiens cDNA FLJ60947 complete cds, highly similar to Coiled-coil domain-containing protein 9 PA

EST sequences (10 of 62) [Show all sequences]

BX282055.1 Clone IMAGp998N0312282_;_IMAGE:5558978 intestine P
BX432961.1 Clone CS0DA004YI04 uncharacterized tissue 3' read P
BX432962.1 Clone CS0DA004YI04 uncharacterized tissue 3' read P
BX409893.2 Clone CS0DA004YI04 uncharacterized tissue 5' read P
BX406409.2 Clone CS0DM011YH21 liver 5' read P
CD356384.1 Clone IMAGE:30401859 vascular 5' read
CF139548.1 Clone IMAGE:3096938 prostate 5' read P
AW390032.1 stomach
AW468183.1 Clone IMAGE:2920827 blood 3' read
CK902266.1 Clone IMAGE:6032439 pancreas 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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