> Protein tyrosine phosphatase type IVA, member 1 (PTP4A1)
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UGID:166111     UniGene Hs.227777     Homo sapiens (human)   PTP4A1 Order cDNA clone, Links
Protein tyrosine phosphatase type IVA, member 1 (PTP4A1)

Human protein-coding gene PTP4A1. Represented by 1180 ESTs from 394 cDNA libraries. Corresponds to reference sequence NM_003463.3. [UniGene 166111 - Hs.227777]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001472631.1 PREDICTED: protein tyrosine phosphatase type IVA 1-like isoform 1 M. musculus 100.0 172
NP_113767.1 Ptp4a1 gene product R. norvegicus 100.0 172
XP_003897829.1 PREDICTED: protein tyrosine phosphatase type IVA 1 P. anubis 100.0 172
NP_001233568.1 PTP4A1 gene product P. troglodytes 100.0 172
NP_003454.1 PTP4A1 gene product H. sapiens 100.0 172
XP_538984.1 PREDICTED: protein tyrosine phosphatase type IVA 1 isoform 1 C. lupus familiaris 100.0 172
XP_001503398.1 PREDICTED: protein tyrosine phosphatase type IVA 1-like isoform 1 E. caballus 100.0 172
XP_003121294.1 PREDICTED: protein tyrosine phosphatase type IVA 1-like isoform 1 S. scrofa 100.0 172
XP_002714569.1 PREDICTED: protein tyrosine phosphatase 4a1-like O. cuniculus 100.0 172
NP_001086844.1 protein tyrosine phosphatase type IVA, member 1 X. laevis 96.5 172
NP_001007776.2 protein tyrosine phosphatase type IVA 1 D. rerio 94.2 172
NP_609780.1 PRL-1, isoform B D. melanogaster 60.2 165
NP_508683.1 Protein PRL-1 C. elegans 57.6 169
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
NP_001193053.1 protein tyrosine phosphatase type IVA 1 B. taurus 99.4 172
XP_004011632.1 PREDICTED: protein tyrosine phosphatase type IVA 1-like isoform 1 O. aries 99.4 172

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; liver; lung; testis; placenta; uncharacterized tissue; uterus; mixed; kidney; skin; mammary gland; mouth; embryonic tissue; prostate; muscle; cervix; stomach; intestine; blood; eye; pancreas; bone marrow; heart; thyroid; adipose tissue; spleen; esophagus; trachea; connective tissue; vascular; ovary; thymus; lymph node; ear; adrenal gland; pharynx; pituitary gland; amniotic fluid; bladder; umbilical cord; salivary gland; ascites; nerve; ganglia; bone; lymph; pineal gland; parathyroid; spinal cord; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q12
UniSTS entry: Chr 6 D6S1901
UniSTS entry: Chr 6 WI-21111 [Map Viewer]
UniSTS entry: Chr 1 D6S1236E
UniSTS entry: Chr 6 D6S1138E.1 [Map Viewer]
UniSTS entry: Chr 6 RH47348 [Map Viewer]
UniSTS entry: Chr 6 D6S1860 [Map Viewer]
UniSTS entry: Chr 6 D6S1860 [Map Viewer]
UniSTS entry: Chr 6 RH46762 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_003463.3 Homo sapiens protein tyrosine phosphatase type IVA, member 1 (PTP4A1), mRNA PA
CR749458.1 Homo sapiens mRNA; cDNA DKFZp779M0721 (from clone DKFZp779M0721) PA
BC045571.1 Homo sapiens protein tyrosine phosphatase type IVA, member 1, mRNA (cDNA clone MGC:57320 IMAGE:4826233), complete cds PA
AJ420505.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2096405 A
AK312526.1 Homo sapiens cDNA, FLJ92892, Homo sapiens protein tyrosine phosphatase type IVA, member 1(PTP4A1), mRNA P
BC023975.2 Homo sapiens protein tyrosine phosphatase type IVA, member 1, mRNA (cDNA clone MGC:1659 IMAGE:2960001), complete cds PA
AB451444.1 Homo sapiens PTP4A1 mRNA for protein tyrosine phosphatase type IVA protein 1, partial cds, clone: FLJ08177AAAF P
AB451314.1 Homo sapiens PTP4A1 mRNA for protein tyrosine phosphatase type IVA protein 1, complete cds, clone: FLJ08177AAAN P
U69701.1 Human protein tyrosine phosphatase hPRL-1N mRNA, partial cds P
U48296.1 Homo sapiens protein tyrosine phosphatase PTPCAAX1 (hPTPCAAX1) mRNA, complete cds P

EST sequences (10 of 1180) [Show all sequences]

AA968713.1 Clone IMAGE:1601129 uncharacterized tissue 3' read A
AA972581.1 Clone IMAGE:1584823 lung 3' read A
AA992571.1 Clone IMAGE:1624728 embryonic tissue 3' read A
AI003756.1 Clone IMAGE:392125 pineal gland 3' read A
AA927908.1 Clone IMAGE:1541414 mixed 3' read
AI027513.1 Clone IMAGE:1650420 parathyroid 3' read A
AI039704.1 Clone IMAGE:1658072 embryonic tissue 3' read A
AI042272.1 Clone IMAGE:1664993 skin 3' read A
AI052652.1 Clone IMAGE:1675673 mixed 3' read A
AI056729.1 Clone IMAGE:1669585 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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