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UGID:165262     UniGene Hs.221847     Homo sapiens (human)   SLC38A2
Solute carrier family 38, member 2 (SLC38A2)

Human protein-coding gene SLC38A2. Represented by 1520 ESTs from 397 cDNA libraries. Corresponds to reference sequence NM_018976.4. [UniGene 165262 - Hs.221847]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001164321.1 PREDICTED: sodium-coupled neutral amino acid transporter 2 isoform 5 P. troglodytes 100.0 505
NP_061849.2 SLC38A2 gene product H. sapiens 100.0 505
NP_780330.2 Slc38a2 gene product M. musculus 93.8 503
NP_001087075.1 solute carrier family 38, member 2 X. laevis 81.0 483
NP_001038569.1 sodium-coupled neutral amino acid transporter 2 D. rerio 78.6 498
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_001095418.1 PREDICTED: sodium-coupled neutral amino acid transporter 2 isoform 2 M. mulatta 98.4 505
XP_003906301.1 PREDICTED: sodium-coupled neutral amino acid transporter 2 P. anubis 98.4 505

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; testis; muscle; uterus; embryonic tissue; liver; trachea; uncharacterized tissue; connective tissue; mammary gland; mouth; mixed; eye; thymus; lung; skin; larynx; intestine; stomach; kidney; vascular; ovary; cervix; lymph node; pancreas; prostate; spinal cord; ascites; bone marrow; blood; bone; salivary gland; lymph; bladder; adrenal gland; adipose tissue; nerve; ear; spleen; ganglia; pharynx; esophagus; umbilical cord; heart; thyroid; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q
UniSTS entry: Chr 12 RH11173
UniSTS entry: Chr 12 RH17405
UniSTS entry: Chr 12 D12S2010 [Map Viewer]
UniSTS entry: Chr 12 RH67932
UniSTS entry: Chr 12 WI-11919 [Map Viewer]
UniSTS entry: Chr 7 POR
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK001700.1 Homo sapiens cDNA FLJ10838 fis, clone NT2RP4001274, weakly similar to Human transporter protein (g17) mRNA P
AB037803.2 Homo sapiens mRNA for KIAA1382 protein, partial cds P
AK172784.1 Homo sapiens cDNA FLJ23945 fis, clone HEP04785, highly similar to Homo sapiens solute carrier family 38, member 2 (SLC38A2) PA
CR457267.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0213D for gene SLC38A2, solute carrier family 38, member 2; complete cds, incl. stopcodon P
NM_018976.4 Homo sapiens solute carrier family 38, member 2 (SLC38A2), mRNA PA
AF298897.1 Homo sapiens amino acid transporter system A (ATA2) mRNA, complete cds P
AF259799.1 Homo sapiens amino acid transporter system A2 (ATA2) mRNA, complete cds PA
AJ344099.1 Homo sapiens mRNA for putative 40-9-1 protein PA
AK291644.1 Homo sapiens cDNA FLJ75876 complete cds, highly similar to Homo sapiens solute carrier family 38, member 2 (SLC38A2), mRNA P
BC029379.1 Homo sapiens solute carrier family 38, member 2, mRNA (cDNA clone IMAGE:4617225), complete cds A
AK293858.1 Homo sapiens cDNA FLJ56316 complete cds, highly similar to Homo sapiens solute carrier family 38, member 2 (SLC38A2), mRNA P
BC016909.1 Homo sapiens solute carrier family 38, member 2, mRNA (cDNA clone IMAGE:4420731), with apparent retained intron A
BC040342.1 Homo sapiens solute carrier family 38, member 2, mRNA (cDNA clone MGC:8808 IMAGE:3874551), complete cds PA

EST sequences (10 of 1520) [Show all sequences]

AA947267.1 Clone IMAGE:1374833 ovary A
AA947363.1 Clone IMAGE:1374857 ovary A
AA903679.1 Clone IMAGE:1517719 uncharacterized tissue 3' read A
AA906052.1 Clone IMAGE:1505571 mixed 3' read A
AA994206.1 Clone IMAGE:1631134 mammary gland 3' read A
AI078756.1 Clone IMAGE:1677194 mixed 3' read
R21187.1 Clone IMAGE:130304 placenta 5' read
AI082442.1 Clone IMAGE:1661964 mixed 3' read A
AI088460.1 Clone IMAGE:1695589 uterus 3' read A
R21888.1 Clone IMAGE:130504 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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