> Lin-7 homolog B (C. elegans) (LIN7B)
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UGID:165250     UniGene Hs.221737     Homo sapiens (human)   LIN7B Order cDNA clone, Links
Lin-7 homolog B (C. elegans) (LIN7B)

Human protein-coding gene LIN7B. Represented by 52 ESTs from 37 cDNA libraries. Corresponds to reference sequence NM_022165.2. [UniGene 165250 - Hs.221737]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001114658.1 PREDICTED: protein lin-7 homolog B-like isoform 2 M. mulatta 100.0 206
XP_003915923.1 PREDICTED: protein lin-7 homolog B P. anubis 100.0 206
NP_071448.1 LIN7B gene product H. sapiens 100.0 206
XP_851922.1 PREDICTED: protein lin-7 homolog B isoform 2 C. lupus familiaris 100.0 206
NP_001231161.1 LIN7B gene product S. scrofa 100.0 206
NP_001040042.1 LIN7B gene product B. taurus 100.0 200
NP_035828.1 Lin7b gene product M. musculus 99.0 206
NP_001018569.2 lin7b gene product D. rerio 94.2 206
NP_001080131.1 lin-7 homolog C X. laevis 89.8 196
NP_651330.1 veli, isoform A D. melanogaster 86.2 194
NP_001122664.2 Protein LIN-7, isoform a C. elegans 76.4 199
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
NP_068526.1 Lin7b gene product R. norvegicus 99.0 206
XP_004071925.1 PREDICTED: protein lin-7 homolog B-like O. latipes 95.8 211

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; heart; mixed; liver; uncharacterized tissue; embryonic tissue; pituitary gland; intestine; eye; pancreas; prostate; testis; kidney; mammary gland; muscle; esophagus; bone; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY358744.1 Homo sapiens clone DNA143514 LIN-7B (UNQ3116) mRNA, complete cds PA
AF311862.1 Homo sapiens Lin-7b mRNA, complete cds PA
NM_022165.2 Homo sapiens lin-7 homolog B (C. elegans) (LIN7B), mRNA P
BC027618.2 Homo sapiens lin-7 homolog B (C. elegans), mRNA (cDNA clone MGC:27097 IMAGE:4830017), complete cds PA

EST sequences (10 of 52) [Show all sequences]

AI090683.1 Clone IMAGE:1692177 heart 3' read P
BX114949.1 Clone IMAGp998A104297_;_IMAGE:1692177 heart P
CB136554.1 Clone L5HLK1-37-H05 liver 5' read P
AI302774.1 Clone IMAGE:1898806 lung 3' read P
AI468225.1 Clone IMAGE:2110720 prostate 3' read
AI539511.1 Clone IMAGE:2089798 mixed 3' read PA
AI670730.1 Clone IMAGE:2316510 kidney 3' read PA
AI684533.1 Clone IMAGE:2301737 mixed 3' read P
AI686521.1 Clone IMAGE:2252978 prostate 3' read
AI953096.1 Clone IMAGE:2469993 brain 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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