> RNA binding motif, single stranded interacting protein 3 (RBMS3)
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UGID:165209     UniGene Hs.221436     Homo sapiens (human)   RBMS3 Order cDNA clone, Links
RNA binding motif, single stranded interacting protein 3 (RBMS3)

Human protein-coding gene RBMS3. Represented by 127 ESTs from 76 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 165209 - Hs.221436]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001095338.2 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3-like isoform 1 M. mulatta 100.0 436
NP_001003793.1 RBMS3 gene product H. sapiens 100.0 436
XP_850695.2 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3 isoform 6 C. lupus familiaris 100.0 435
XP_003309728.1 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3 isoform 2 P. troglodytes 100.0 420
XP_001492687.2 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3 isoform 1 E. caballus 99.8 435
NP_001165594.1 Rbms3 gene product M. musculus 95.1 430
NP_001070184.1 rbms3 gene product D. rerio 90.8 380
NP_001080407.1 RNA binding motif, single stranded interacting protein 1 X. laevis 79.1 373
NP_729057.2 alan shepard, isoform C D. melanogaster 59.7 313
NP_001254905.1 Protein SUP-26, isoform p C. elegans 58.8 216
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_001252034.3 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3 isoform 1 B. taurus 99.1 435
XP_004018248.1 PREDICTED: RNA-binding motif, single-stranded-interacting protein 3 isoform 2 O. aries 99.1 435

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; lung; brain; heart; mixed; pancreas; liver; stomach; connective tissue; embryonic tissue; vascular; testis; adipose tissue; mouth; pineal gland; skin; intestine; trachea; placenta; nerve; muscle; eye; mammary gland; ganglia; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p24-p23
UniSTS entry: Chr 3 RH92986
UniSTS entry: Chr 3 SGC34293 [Map Viewer]
UniSTS entry: Chr 3 RBMS3_9544
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AF023259.1 Homo sapiens RNA-binding protein (RBMS3) mRNA, complete cds P
AY236872.1 Homo sapiens RNA binding motif single stranded interacting protein 3 isoform transcript variant DD23-S (RBMS3) mRNA, complete cds P
AY236871.1 Homo sapiens RNA binding motif single stranded interacting protein 3 isoform transcript variant DD23-L (RBMS3) mRNA, complete cds P
NM_014483.3 Homo sapiens RNA binding motif, single stranded interacting protein 3 (RBMS3), transcript variant 2, mRNA P
NM_001003793.2 Homo sapiens RNA binding motif, single stranded interacting protein 3 (RBMS3), transcript variant 1, mRNA PA
NM_001003792.2 Homo sapiens RNA binding motif, single stranded interacting protein 3 (RBMS3), transcript variant 3, mRNA PA
BC117315.1 Homo sapiens RNA binding motif, single stranded interacting protein, mRNA (cDNA clone MGC:150924 IMAGE:40125866), complete cds P
AK292789.1 Homo sapiens cDNA FLJ77203 complete cds, highly similar to Homo sapiens RNA binding motif, single stranded interacting protein (RBMS3), transcript variant 2, mRNA P
AK097311.1 Homo sapiens cDNA FLJ39992 fis, clone STOMA2001025, moderately similar to Homo sapiens RNA-binding protein (RBMS3) mRNA P
AK093863.1 Homo sapiens cDNA FLJ36544 fis, clone TRACH2006378
AL831860.1 Homo sapiens mRNA; cDNA DKFZp761G0917 (from clone DKFZp761G0917) A
BC143521.1 Homo sapiens cDNA clone MGC:177047 IMAGE:9052030, complete cds P
NM_001177712.1 Homo sapiens RNA binding motif, single stranded interacting protein 3 (RBMS3), transcript variant 4, mRNA P
NM_001177711.1 Homo sapiens RNA binding motif, single stranded interacting protein 3 (RBMS3), transcript variant 5, mRNA PA

EST sequences (10 of 127) [Show all sequences]

AA909854.1 Clone IMAGE:1522233 lung 3' read
BX105959.1 Clone IMAGp998J15274_;_IMAGE:46860 brain
BX112777.1 Clone IMAGp998H103854_;_IMAGE:1522233 lung
AI190902.1 Clone IMAGE:1733979 testis 3' read PA
AI267898.1 Clone IMAGE:1909309 lung 3' read
CB161489.1 Clone L17N670205n1-34-C12 liver 5' read P
AI367813.1 Clone IMAGE:1934958 mixed 3' read
AI379723.1 Clone IMAGE:2067163 embryonic tissue 3' read A
AI732912.1 Clone IMAGE:1415162 lung 3' read
AI791229.1 Clone IMAGE:1415162 lung 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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