> Solute carrier family 6, member 18 (SLC6A18)
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UGID:164749     UniGene Hs.213284     Homo sapiens (human)   SLC6A18 Order cDNA clone, Links
Solute carrier family 6, member 18 (SLC6A18)

Human protein-coding gene SLC6A18. Represented by 15 ESTs from 6 cDNA libraries. EST representation biased toward kidney. Corresponds to reference sequence NM_182632.2. [UniGene 164749 - Hs.213284]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_872438.2 SLC6A18 gene product H. sapiens 100.0 627
NP_001035782.1 Slc6a18 gene product M. musculus 77.3 599
NP_001108369.1 slc6a18 gene product D. rerio 64.5 578
NP_001087657.1 solute carrier family 6 (neutral amino acid transporter), member 19 X. laevis 59.6 587
NP_611340.1 CG43066, isoform A D. melanogaster 49.1 562
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_517609.3 PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 P. troglodytes 97.9 628
XP_003899515.1 PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 P. anubis 93.1 608

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: kidney [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; intestine; uncharacterized tissue; mixed; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5p15.33
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_182632.2 Homo sapiens solute carrier family 6, member 18 (SLC6A18), mRNA PA
BC056757.1 Homo sapiens solute carrier family 6, member 18, mRNA (cDNA clone MGC:50843 IMAGE:5758770), complete cds PA
AK055798.1 Homo sapiens cDNA FLJ31236 fis, clone KIDNE2004828, moderately similar to Mus musculus orphan transporter isoform A12 (Xtrp2) mRNA P
AK298257.1 Homo sapiens cDNA FLJ53853 complete cds, highly similar to Sodium-and chloride-dependent transporter XTRP2 P

EST sequences (15)

AI633966.1 Clone IMAGE:2299761 kidney 3' read P
AI889085.1 Clone IMAGE:2075924 intestine 3' read PA
AW293344.1 Clone IMAGE:2726843 uncharacterized tissue 3' read A
BE465178.1 Clone IMAGE:3183276 kidney 3' read P
DA622279.1 Clone KIDNE2001405 kidney 5' read P
AW300281.1 Clone IMAGE:2773918 kidney 3' read P
DA624909.1 Clone KIDNE2004828 kidney 5' read P
AW302227.1 Clone IMAGE:2768622 kidney 3' read P
DA634726.1 Clone KIDNE2016675 kidney 5' read P
DA634818.1 Clone KIDNE2016779 kidney 5' read P
BF590014.1 Clone IMAGE:3259489 kidney 3' read
DB320578.1 Clone KIDNE2004828 kidney 3' read P
DC361378.1 Clone KIDNE2000814 kidney 5' read P
BM923208.1 Clone IMAGE:5758770 mixed 5' read P
AA214452.1 Clone IMAGE:649483 testis 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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