> Tumor necrosis factor, alpha-induced protein 3 (TNFAIP3)
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UGID:164371     UniGene Hs.211600     Homo sapiens (human)   TNFAIP3 Order cDNA clone, Links
Tumor necrosis factor, alpha-induced protein 3 (TNFAIP3)

Human protein-coding gene TNFAIP3. Represented by 383 ESTs from 161 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 164371 - Hs.211600]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003311560.1 PREDICTED: tumor necrosis factor alpha-induced protein 3 isoform 1 P. troglodytes 100.0 789
NP_001257436.1 TNFAIP3 gene product H. sapiens 100.0 789
NP_033423.3 Tnfaip3 gene product M. musculus 92.5 774
NP_001087109.1 tumor necrosis factor, alpha-induced protein 3 X. laevis 65.7 767
XP_692922.3 PREDICTED: tumor necrosis factor alpha-induced protein 3 D. rerio 61.4 759
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001096457.1 PREDICTED: tumor necrosis factor alpha-induced protein 3 isoform 4 M. mulatta 99.2 789
XP_003898164.1 PREDICTED: tumor necrosis factor alpha-induced protein 3 isoform 1 P. anubis 99.2 789

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; lung; trachea; larynx; skin; brain; lymph node; connective tissue; vascular; heart; blood; stomach; testis; kidney; muscle; ovary; thymus; placenta; intestine; mixed; uterus; pancreas; mouth; prostate; spleen; eye; embryonic tissue; bone marrow; liver; cervix; pharynx; mammary gland; lymph; adrenal gland; tonsil; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q23
UniSTS entry: Chr 6 STS-R70479 [Map Viewer]
UniSTS entry: Chr 6 STS-M59465
UniSTS entry: Chr 6 SHGC-132182
UniSTS entry: Chr 6 D6S2077
UniSTS entry: Chr 6 D6S1858
UniSTS entry: Chr 6 G10608
UniSTS entry: Chr 6 PMC355833P3
UniSTS entry: Chr 6 TNFAIP3_431
UniSTS entry: Chr 6 PMC135646P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (25)

NM_006290.3 Homo sapiens tumor necrosis factor, alpha-induced protein 3 (TNFAIP3), transcript variant 3, mRNA PA
M59465.1 Human tumor necrosis factor alpha inducible protein A20 mRNA, complete cds P
AL157444.1 Homo sapiens mRNA; cDNA DKFZp434B029 (from clone DKFZp434B029); partial cds PA
AY820830.1 Homo sapiens tumor necrosis factor alpha induced protein 3 mRNA, partial cds P
BC113871.1 Homo sapiens tumor necrosis factor, alpha-induced protein 3, mRNA (cDNA clone MGC:138688 IMAGE:40036694), complete cds P
BC114480.1 Homo sapiens tumor necrosis factor, alpha-induced protein 3, mRNA (cDNA clone MGC:138687 IMAGE:40036692), complete cds P
AK312862.1 Homo sapiens cDNA, FLJ93305, Homo sapiens tumor necrosis factor, alpha-induced protein 3(TNFAIP3), mRNA P
FJ434419.1 Homo sapiens isolate mt2 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434418.1 Homo sapiens isolate mt18 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434417.1 Homo sapiens isolate mt17 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434415.1 Homo sapiens isolate mt15 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434414.1 Homo sapiens isolate mt14 tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434413.1 Homo sapiens isolate mt13 tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434412.1 Homo sapiens isolate mt12 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434411.1 Homo sapiens isolate mt11 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434410.1 Homo sapiens isolate mt10 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434409.1 Homo sapiens isolate mt9 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434408.1 Homo sapiens isolate mt8 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434407.1 Homo sapiens isolate mt7 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434406.1 Homo sapiens isolate mt6 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434405.1 Homo sapiens isolate mt5 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
FJ434402.1 Homo sapiens isolate mt1 truncated tumor necrosis factor alpha-induced protein 3 (TNFAIP3) mRNA, complete cds P
NM_001270508.1 Homo sapiens tumor necrosis factor, alpha-induced protein 3 (TNFAIP3), transcript variant 1, mRNA PA
NM_001270507.1 Homo sapiens tumor necrosis factor, alpha-induced protein 3 (TNFAIP3), transcript variant 2, mRNA PA
BC041790.1 Homo sapiens cDNA clone IMAGE:5271522, containing frame-shift errors PA

EST sequences (10 of 383) [Show all sequences]

AA907536.1 Clone IMAGE:1540510 mixed 3' read P
AI028304.1 Clone IMAGE:1644051 testis 3' read A
AI080596.1 Clone IMAGE:1680444 skin 3' read A
CB151830.1 Clone C1SNU17-24-B08 cervix 5' read
AI275801.1 Clone IMAGE:1990071 uterus 3' read A
AI086721.1 Clone IMAGE:1679821 skin 3' read A
AI281581.1 Clone IMAGE:1968970 lymph node 3' read
AI285468.1 Clone IMAGE:1968034 lymph node 3' read A
AI286032.1 Clone IMAGE:1855056 mixed 3' read A
AI334959.1 Clone IMAGE:2054964 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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