> T-box, brain, 1 (TBR1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:164133     UniGene Hs.210862     Homo sapiens (human)   TBR1 Order cDNA clone, Links
T-box, brain, 1 (TBR1)

Human protein-coding gene TBR1. Represented by 174 ESTs from 27 cDNA libraries. EST representation biased toward brain; fetus. Corresponds to reference sequence NM_006593.2. [UniGene 164133 - Hs.210862]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003907583.1 PREDICTED: T-box brain protein 1 P. anubis 100.0 681
XP_001150172.1 PREDICTED: T-box brain protein 1 P. troglodytes 100.0 681
NP_006584.1 TBR1 gene product H. sapiens 100.0 681
XP_004005431.1 PREDICTED: T-box brain protein 1 O. aries 100.0 520
NP_001178978.1 T-box brain protein 1 B. taurus 99.8 681
XP_545492.2 PREDICTED: T-box brain protein 1 C. lupus familiaris 99.7 681
NP_033348.2 Tbr1 gene product M. musculus 99.7 680
XP_001056898.1 PREDICTED: T-box brain gene 1 R. norvegicus 99.7 680
XP_001493157.2 PREDICTED: t-box brain protein 1 E. caballus 99.5 426
XP_002798955.1 PREDICTED: t-box brain protein 1-like M. mulatta 99.5 625
NP_001108562.1 tbr1b gene product D. rerio 88.5 675
NP_001081810.1 eomesodermin X. laevis 66.0 678
NP_498640.1 Protein MLS-1 C. elegans 49.2 179
NP_648283.1 Dorsocross1, isoform A D. melanogaster 48.3 211
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_001928633.1 PREDICTED: T-box brain protein 1 isoform 1 S. scrofa 99.1 680
XP_001366756.1 PREDICTED: t-box brain protein 1-like M. domestica 98.8 678

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: brain [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q24
UniSTS entry: Chr 2 TBR1
UniSTS entry: Chr 2 1704
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_006593.2 Homo sapiens T-box, brain, 1 (TBR1), mRNA P
BC104844.1 Homo sapiens T-box, brain, 1, mRNA (cDNA clone MGC:132504 IMAGE:8143847), complete cds P
BC113418.1 Homo sapiens T-box, brain, 1, mRNA (cDNA clone MGC:141978 IMAGE:8322470), complete cds P
U49250.1 Human putative cerebral cortex transcriptional regulator T-Brain-1 (Tbr-1) mRNA, complete cds P
AK315865.1 Homo sapiens cDNA, FLJ79514 complete cds, highly similar to T-brain-1 protein P
AK312567.1 Homo sapiens cDNA, FLJ92942, highly similar to Homo sapiens T-box, brain, 1 (TBR1), mRNA P
BC029289.1 Homo sapiens T-box, brain, 1, mRNA (cDNA clone IMAGE:5181773), partial cds P
AK316161.1 Homo sapiens cDNA, FLJ79060 complete cds, highly similar to T-brain-1 protein P
AK299533.1 Homo sapiens cDNA FLJ51062 complete cds, highly similar to T-brain-1 protein P
AK297438.1 Homo sapiens cDNA FLJ50991 complete cds, highly similar to T-brain-1 protein P
AK297168.1 Homo sapiens cDNA FLJ59717 complete cds, highly similar to T-brain-1 protein P

EST sequences (10 of 174) [Show all sequences]

R18350.1 Clone IMAGE:30809 brain 5' read
BX114402.1 Clone IMAGp998F12274_;_IMAGE:46938 brain
AI201654.1 Clone IMAGE:1859079 brain 3' read P
R54288.1 Clone IMAGE:39478 brain 5' read
AI815469.1 Clone IMAGE:2517921 brain 5' read
BX418656.2 Clone CS0DF008YG10 brain 5' read P
BX418703.2 Clone CS0DF008YF20 brain 5' read P
BX420367.2 Clone CS0DF027YH06 brain 5' read P
BX441549.2 Clone CS0DF018YJ12 brain 5' read P
AW003023.1 Clone IMAGE:2475751 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help