> C-terminal binding protein 1 (CTBP1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:163628     UniGene Hs.208597     Homo sapiens (human)   CTBP1 Order cDNA clone, Links
C-terminal binding protein 1 (CTBP1)

Human protein-coding gene CTBP1. Represented by 516 ESTs from 223 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 163628 - Hs.208597]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001083191.1 PREDICTED: c-terminal-binding protein 1-like isoform 1 M. mulatta 100.0 439
XP_003890963.1 PREDICTED: C-terminal-binding protein 1 isoform 2 P. anubis 100.0 439
NP_001319.1 CTBP1 gene product H. sapiens 100.0 439
XP_003950313.1 PREDICTED: LOW QUALITY PROTEIN: C-terminal-binding protein 1 P. troglodytes 100.0 428
NP_001185788.1 Ctbp1 gene product M. musculus 99.5 439
XP_001488362.2 PREDICTED: c-terminal-binding protein 1 E. caballus 99.5 430
NP_062074.2 Ctbp1 gene product R. norvegicus 99.5 429
NP_001079151.1 C-terminal-binding protein 1 X. laevis 98.0 439
NP_001035480.1 zgc:136929 gene product D. rerio 96.1 439
NP_524336.2 C-terminal binding protein, isoform A D. melanogaster 79.7 375
NP_001257031.1 Protein CTBP-1, isoform b C. elegans 65.8 369
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_855070.2 PREDICTED: LOW QUALITY PROTEIN: C-terminal-binding protein 1 C. lupus familiaris 99.1 427
XP_001510652.2 PREDICTED: C-terminal-binding protein 1-like isoform 1 O. anatinus 98.6 429

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; lung; mixed; uncharacterized tissue; placenta; adipose tissue; adrenal gland; skin; bone; cervix; thymus; ascites; stomach; prostate; lymph; kidney; tonsil; mammary gland; testis; eye; intestine; pancreas; liver; ovary; lymph node; connective tissue; uterus; ear; blood; heart; muscle; parathyroid; bone marrow; pituitary gland; thyroid; spleen; trachea; nerve; salivary gland; epididymis; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16
UniSTS entry: Chr 4 RH41962 [Map Viewer]
UniSTS entry: Chr 4 SHGC-35677
UniSTS entry: Chr 4 RH18046 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AF091555.1 Homo sapiens C-terminal binding protein (CTBP1) mRNA, complete cds P
BC053320.1 Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone MGC:59831 IMAGE:6461670), complete cds PA
NM_001328.2 Homo sapiens C-terminal binding protein 1 (CTBP1), transcript variant 1, mRNA P
BC064333.1 Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone IMAGE:5806192) PA
BC072021.1 Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone IMAGE:6338360), partial cds PA
NM_001012614.1 Homo sapiens C-terminal binding protein 1 (CTBP1), transcript variant 2, mRNA P
BC098400.1 Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone MGC:104684 IMAGE:30344174), complete cds PA
U37408.1 Homo sapiens phosphoprotein CtBP mRNA, complete cds P
BC011655.2 Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone MGC:12707 IMAGE:4128336), complete cds PA

EST sequences (10 of 516) [Show all sequences]

AA865843.1 Clone IMAGE:1456851 kidney 3' read A
AA922383.1 Clone IMAGE:1474398 intestine 3' read A
AA985158.1 Clone IMAGE:1616295 brain 3' read P
AI003566.1 Clone IMAGE:1387880 parathyroid 3' read A
AI015269.1 Clone IMAGE:1641218 testis 3' read A
AI022104.1 Clone IMAGE:1650849 parathyroid 3' read P
AI074182.1 Clone IMAGE:1681950 skin 3' read
AI090558.1 Clone IMAGE:1691574 heart 3' read A
R23068.1 Clone IMAGE:131338 placenta 5' read
CB068941.1 Clone IMAGE:6554501 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help