> Von Willebrand factor A domain containing 5B1 (VWA5B1)
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UGID:163132     UniGene Hs.205178     Homo sapiens (human)   VWA5B1 Links
Von Willebrand factor A domain containing 5B1 (VWA5B1)

Human protein-coding gene VWA5B1. Represented by 30 ESTs from 10 cDNA libraries. EST representation biased toward testis. Corresponds to reference sequence NM_001039500.2. [UniGene 163132 - Hs.205178]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001034589.2 VWA5B1 gene product H. sapiens 100.0 1214
NP_083677.1 Vwa5b1 gene product M. musculus 72.5 1214
XP_692918.4 PREDICTED: von Willebrand factor A domain-containing protein 5B1 D. rerio 48.7 1267
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003891304.1 PREDICTED: von Willebrand factor A domain-containing protein 5B1 P. anubis 95.6 1214
XP_001108622.2 PREDICTED: von Willebrand factor A domain-containing protein 5B1-like M. mulatta 95.5 1214

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; mixed; liver; lung
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.12
UniSTS entry: Chr 1 SHGC-67307
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK125833.1 Homo sapiens cDNA FLJ43845 fis, clone TESTI4006326 P
BC101379.2 Homo sapiens von Willebrand factor A domain containing 5B1, mRNA (cDNA clone IMAGE:40026019), partial cds P
NM_001039500.2 Homo sapiens von Willebrand factor A domain containing 5B1 (VWA5B1), mRNA P
BC101381.1 Homo sapiens von Willebrand factor A domain containing 5B1, mRNA (cDNA clone IMAGE:40026021), partial cds P
BC101380.1 Homo sapiens von Willebrand factor A domain containing 5B1, mRNA (cDNA clone IMAGE:40026020), partial cds P
BC101378.1 Homo sapiens von Willebrand factor A domain containing 5B1, mRNA (cDNA clone IMAGE:40026017), partial cds P
AK295797.1 Homo sapiens cDNA FLJ59297 partial cds, weakly similar to Loss of heterozygosity 11 chromosomal region 2gene A protein homolog P

EST sequences (10 of 30) [Show all sequences]

BX116920.1 Clone IMAGp998B205826_;_IMAGE:2347699 mixed
AI797955.1 Clone IMAGE:2347699 mixed 3' read P
DA319775.1 Clone BRHIP3012176 brain 5' read
DA806846.1 Clone OCBBF3022329 brain 5' read P
DB021588.1 Clone TESTI2002245 testis 5' read P
DA756742.1 Clone NT2RP8003621 testis 5' read P
DB073914.1 Clone TESTI4017394 testis 5' read P
DB335963.1 Clone TESTI2002245 testis 3' read P
DB068473.1 Clone TESTI4010409 testis 5' read
DB083354.1 Clone TESTI4029959 testis 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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