> Lipocalin 2 (LCN2)
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UGID:162976     UniGene Hs.204238     Homo sapiens (human)   LCN2 Order cDNA clone, Links
Lipocalin 2 (LCN2)

Human protein-coding gene LCN2. Represented by 384 ESTs from 134 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_005564.3. [UniGene 162976 - Hs.204238]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005555.2 LCN2 gene product H. sapiens 100.0 197
NP_032517.1 Lcn2 gene product M. musculus 64.3 199
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_520287.1 PREDICTED: neutrophil gelatinase-associated lipocalin isoform 3 P. troglodytes 99.5 197
XP_003911948.1 PREDICTED: neutrophil gelatinase-associated lipocalin P. anubis 91.4 197

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; intestine; stomach; blood; ovary; uncharacterized tissue; pharynx; lung; ascites; lymph node; bone marrow; esophagus; prostate; trachea; connective tissue; uterus; kidney; eye; mammary gland; cervix; mixed; amniotic fluid; mouth; thyroid; liver; muscle; bone; embryonic tissue; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34
UniSTS entry: Chr 9 RH93784
UniSTS entry: Chr 9 STS-X99133
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_005564.3 Homo sapiens lipocalin 2 (LCN2), mRNA PA
CR542092.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0537D for gene LCN2, lipocalin 2 (oncogene 24p3); complete cds, without stopcodon P
AK307311.1 Homo sapiens cDNA, FLJ97259
EU644752.1 Homo sapiens neutrophil gelatinase-associated lipocalin (NGAL) mRNA, complete cds P
BC033089.1 Homo sapiens lipocalin 2, mRNA (cDNA clone MGC:45655 IMAGE:5421124), complete cds PA
AK301694.1 Homo sapiens cDNA FLJ55416 complete cds, highly similar to Neutrophil gelatinase-associated lipocalin precursor P
S75256.1 HNL=neutrophil lipocalin [human, ovarian cancer cell line OC6, mRNA Partial, 534 nt] P
AK316217.1 Homo sapiens cDNA, FLJ79116 complete cds, highly similar to Neutrophil gelatinase-associated lipocalin precursor P
X83006.1 H.sapiens mRNA for neutrophil gelatinase associated lipocalin P

EST sequences (10 of 384) [Show all sequences]

BX107907.1 Clone IMAGp998E181821_;_IMAGE:741497 ovary P
AI199258.1 Clone IMAGE:1943903 prostate 3' read A
CB120833.1 Clone C1SNU17-1-F07 cervix 5' read
CB146863.1 Clone L9SNU354-22-D02 liver 5' read P
AI283967.1 Clone IMAGE:1962031 intestine 3' read PA
AI284506.1 Clone IMAGE:1962361 intestine 3' read P
AI306666.1 Clone IMAGE:1900321 kidney 3' read PA
AI473481.1 Clone IMAGE:2141766 stomach 3' read A
AI474120.1 Clone IMAGE:2155711 intestine 3' read PA
AI541032.1 prostate 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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