> Interferon-induced protein with tetratricopeptide repeats 1 (IFIT1)
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UGID:134072     UniGene Hs.20315     Homo sapiens (human)   IFIT1 Order cDNA clone, Links
Interferon-induced protein with tetratricopeptide repeats 1 (IFIT1)

Human protein-coding gene IFIT1. Represented by 527 ESTs from 196 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 134072 - Hs.20315]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001257856.1 IFIT1 gene product H. sapiens 100.0 477
NP_001103987.1 uncharacterized protein LOC667373 isoform 1 M. musculus 62.4 455
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
NP_001192276.1 IFIT1 gene product P. troglodytes 99.2 477
XP_003904027.1 PREDICTED: interferon-induced protein with tetratricopeptide repeats 1 P. anubis 94.6 477

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; mixed; prostate; bladder; ear; cervix; esophagus; intestine; blood; mammary gland; placenta; lung; heart; pituitary gland; kidney; uncharacterized tissue; ovary; liver; connective tissue; skin; pharynx; testis; pancreas; eye; thyroid; trachea; bone; stomach; thymus; muscle; mouth; adrenal gland; embryonic tissue; spleen; vascular; nerve; ganglia; pineal gland; parathyroid; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q23.31
UniSTS entry: Chr 10 RH17956 [Map Viewer]
UniSTS entry: Chr 10 RH77911
UniSTS entry: Chr 10 PMC135632P1
UniSTS entry: D10S1615
UniSTS entry: Chr 10 IFIT1__6442
UniSTS entry: Chr 10 G15877
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT006667.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 mRNA, complete cds P
NM_001548.4 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 (IFIT1), transcript variant 1, mRNA PA
BC007091.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1, mRNA (cDNA clone MGC:14710 IMAGE:4250452), complete cds PA
AK314588.1 Homo sapiens cDNA, FLJ95422, highly similar to Homo sapiens interferon-induced protein with tetratricopeptiderepeats 1 (IFIT1), mRNA P
AK308688.1 Homo sapiens cDNA, FLJ98729 PA
X03557.1 Human mRNA for 56-KDa protein induced by interferon P
NM_001270929.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 (IFIT1), transcript variant 4, mRNA PA
NM_001270927.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 (IFIT1), transcript variant 2, mRNA PA
NM_001270930.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 (IFIT1), transcript variant 5, mRNA PA
NM_001270928.1 Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 (IFIT1), transcript variant 3, mRNA PA

EST sequences (10 of 527) [Show all sequences]

AA975472.1 Clone IMAGE:1558193 lung 3' read A
AA988761.1 Clone IMAGE:1605415 kidney 3' read A
AI003043.1 Clone IMAGE:1698802 kidney 3' read A
AI038023.1 Clone IMAGE:1657761 embryonic tissue 3' read A
AI081425.1 Clone IMAGE:1680017 skin 3' read A
AI087789.1 Clone IMAGE:1566713 mixed 3' read A
AI084938.1 Clone IMAGE:1653688 mixed 3' read A
AI123179.1 Clone IMAGE:1693657 heart 3' read A
AI142937.1 Clone IMAGE:1679501 skin 3' read A
CB069692.1 Clone IMAGE:6553501 pancreas 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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