> Synaptonemal complex protein 2 (SYCP2)
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UGID:162812     UniGene Hs.202676     Homo sapiens (human)   SYCP2 Order cDNA clone, Links
Synaptonemal complex protein 2 (SYCP2)

Human protein-coding gene SYCP2. Represented by 108 ESTs from 39 cDNA libraries. Corresponds to reference sequence NM_014258.2. [UniGene 162812 - Hs.202676]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055073.2 SYCP2 gene product H. sapiens 100.0 1529
NP_796165.2 Sycp2 gene product M. musculus 71.0 1498
XP_685048.4 PREDICTED: hypothetical protein LOC557000 D. rerio 64.6 130
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_514753.4 PREDICTED: synaptonemal complex protein 2 isoform 2 P. troglodytes 98.6 1529
XP_003904590.1 PREDICTED: synaptonemal complex protein 2 P. anubis 96.5 1529

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; stomach; mammary gland; brain; kidney; connective tissue; uterus; mixed; eye; liver; placenta; bone; uncharacterized tissue; muscle; blood; heart; lung; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.33
UniSTS entry: Chr 20 SHGC-79529
UniSTS entry: Chr 20 RH92762
UniSTS entry: Chr 20 SYCP2_9099
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

Y08982.1 H.sapiens mRNA for synaptonemal complex lateral element protein P
BX649108.1 Homo sapiens mRNA; cDNA DKFZp686I1629 (from clone DKFZp686I1629) PA
BX648091.1 Homo sapiens mRNA; cDNA DKFZp686O1832 (from clone DKFZp686O1832) P
NM_014258.2 Homo sapiens synaptonemal complex protein 2 (SYCP2), mRNA PA
BC132864.1 Homo sapiens synaptonemal complex protein 2, mRNA (cDNA clone MGC:164495 IMAGE:40146886), complete cds P
BC132870.1 Homo sapiens synaptonemal complex protein 2, mRNA (cDNA clone MGC:164501 IMAGE:40146892), complete cds P
BC146798.1 Homo sapiens synaptonemal complex protein 2, mRNA (cDNA clone IMAGE:8860302), partial cds P
AK308889.1 Homo sapiens cDNA, FLJ98930 P
AL080226.1 Homo sapiens mRNA; cDNA DKFZp566K0247 (from clone DKFZp566K0247); partial cds PA
BC040566.1 Homo sapiens synaptonemal complex protein 2, mRNA (cDNA clone IMAGE:5267059), partial cds PA

EST sequences (10 of 108) [Show all sequences]

AI081699.1 Clone IMAGE:1653224 mixed 3' read
BX114874.1 Clone IMAGp998H121786_;_IMAGE:728123 testis P
R36116.1 Clone IMAGE:136863 placenta 3' read A
R36215.1 Clone IMAGE:136863 placenta 5' read
CB217337.1 Clone IMAGE:5794927 bone 3' read
CB217338.1 Clone IMAGE:5794927 bone 5' read
AI678059.1 Clone IMAGE:2330126 mixed 3' read P
AI694345.1 Clone IMAGE:2331119 mixed 3' read PA
AI698586.1 Clone IMAGE:2302415 mixed 3' read A
Z21460.1 testis


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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