> Translocator protein (18kDa) (TSPO)
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UGID:130700     UniGene Hs.202     Homo sapiens (human)   TSPO Order cDNA clone, Links
Translocator protein (18kDa) (TSPO)

Human protein-coding gene TSPO. Represented by 500 ESTs from 187 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 130700 - Hs.202]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001243459.1 TSPO gene product H. sapiens 100.0 168
NP_033905.3 Tspo gene product M. musculus 85.8 168
NP_001080225.1 translocator protein (18kDa) X. laevis 67.7 155
NP_001006032.1 tspo gene product D. rerio 66.5 155
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001108482.1 PREDICTED: translocator protein-like isoform 2 M. mulatta 99.4 168
XP_003905710.1 PREDICTED: translocator protein isoform 1 P. anubis 99.4 168

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; lung; skin; uncharacterized tissue; intestine; brain; ascites; bladder; salivary gland; eye; pancreas; lymph; placenta; uterus; stomach; bone; prostate; blood; bone marrow; mammary gland; lymph node; kidney; connective tissue; larynx; cervix; liver; heart; muscle; ovary; embryonic tissue; adipose tissue; spleen; nerve; umbilical cord; pituitary gland; thyroid; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.31
UniSTS entry: Chr 22 RH27789
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AF075589.1 Homo sapiens MDA-MB-231 peripheral-type benzodiazepine receptor (PBR) mRNA, partial cds P
AF075590.1 Homo sapiens MCF-7 peripheral-type benzodiazepine receptor (PBR) mRNA, partial cds P
BT006949.1 Homo sapiens benzodiazapine receptor (peripheral) mRNA, complete cds P
NM_000714.5 Homo sapiens translocator protein (18kDa) (TSPO), transcript variant PBR, mRNA PA
CR456409.1 Homo sapiens BZRP full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.BZRP.V2) P
CR457007.1 Homo sapiens full open reading frame cDNA clone RZPDo834G035D for gene BZRP, benzodiazapine receptor (peripheral); complete cds, incl. stopcodon P
AY998017.1 Homo sapiens peripheral benzodiazepine receptor (PBR) mRNA, complete cds P
BC001110.2 Homo sapiens translocator protein (18kDa), mRNA (cDNA clone MGC:1184 IMAGE:2989070), complete cds PA
L21950.1 Human peripheral benzodiazepine receptor related mRNA sequence P
M36035.1 Human peripheral benzodiazepine receptor (hpbs) mRNA, complete cds P
NM_001256531.1 Homo sapiens translocator protein (18kDa) (TSPO), transcript variant 4, mRNA PA
NM_001256530.1 Homo sapiens translocator protein (18kDa) (TSPO), transcript variant 3, mRNA PA
NR_046308.1 Homo sapiens translocator protein (18kDa) (TSPO), transcript variant PBR-S, non-coding RNA PA

EST sequences (10 of 500) [Show all sequences]

AA975879.1 Clone IMAGE:1558311 lung 3' read
AI000733.1 Clone IMAGE:1613112 uncharacterized tissue 3' read A
AA909594.1 Clone IMAGE:1522942 mixed 3' read
AI015838.1 Clone IMAGE:1622232 embryonic tissue 3' read A
AA927833.1 Clone IMAGE:1563719 mixed 3' read
AI032217.1 Clone IMAGE:1605597 kidney 3' read A
AI038902.1 Clone IMAGE:1664190 skin 3' read
AI073719.1 Clone IMAGE:1664888 skin 3' read
AI088218.1 Clone IMAGE:1693497 heart 3' read A
AI095100.1 Clone IMAGE:1686786 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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