> CDK5 regulatory subunit associated protein 3 (CDK5RAP3)
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UGID:134045     UniGene Hs.20157     Homo sapiens (human)   CDK5RAP3 Order cDNA clone, Links
CDK5 regulatory subunit associated protein 3 (CDK5RAP3)

Human protein-coding gene CDK5RAP3. Represented by 1260 ESTs from 366 cDNA libraries. Corresponds to reference sequence NM_176096.1. [UniGene 134045 - Hs.20157]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003315426.1 PREDICTED: CDK5 regulatory subunit-associated protein 3 P. troglodytes 100.0 530
NP_788276.1 CDK5RAP3 gene product H. sapiens 100.0 505
NP_084524.1 CDK5 regulatory subunit-associated protein 3 M. musculus 93.4 502
NP_001002105.1 cdk5rap3 gene product D. rerio 72.2 504
NP_001089976.1 CDK5 regulatory subunit associated protein 3 X. laevis 64.6 507
NP_507910.1 Protein Y113G7B.16 C. elegans 55.9 270
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_002800454.1 PREDICTED: CDK5 regulatory subunit-associated protein 3 M. mulatta 98.9 530
XP_003912707.1 PREDICTED: CDK5 regulatory subunit-associated protein 3 P. anubis 98.3 524

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; thymus; uncharacterized tissue; uterus; placenta; intestine; liver; embryonic tissue; eye; mammary gland; blood; kidney; prostate; esophagus; heart; skin; lung; connective tissue; mixed; pancreas; stomach; spleen; ovary; mouth; thyroid; pharynx; cervix; lymph node; adrenal gland; bladder; adipose tissue; epididymis; lymph; trachea; bone marrow; muscle; nerve; ganglia; umbilical cord; bone; larynx; pituitary gland; vascular; pineal gland; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.32
UniSTS entry: Chr 20 IB3577
UniSTS entry: Chr 17 WI-11758 [Map Viewer]
UniSTS entry: Chr 17 G59781
UniSTS entry: Chr 17 RH65642
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_176096.1 Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), mRNA P
BC072435.1 Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA (cDNA clone MGC:87717 IMAGE:5751801), complete cds PA
AK223387.1 Homo sapiens mRNA for CDK5 regulatory subunit associated protein 3 isoform b variant, clone: FCC106G06 P
AK023722.1 Homo sapiens cDNA FLJ13660 fis, clone PLACE1011586, highly similar to Rattus norvegicus clone C53 CDK5 activator-binding protein mRNA P
AF217982.2 Homo sapiens CDK5 regulatory subunit associated protein IC53-2 (PP1553) mRNA, complete cds PA
AK225274.1 Homo sapiens mRNA for CDK5 regulatory subunit associated protein 3 isoform b variant, clone: DMC09120 PA
BC009957.2 Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA (cDNA clone MGC:14989 IMAGE:4130677), complete cds PA
AF343090.1 Homo sapiens HSF-27 protein mRNA, complete cds P
BC013407.2 Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA (cDNA clone IMAGE:2988445), partial cds PA
AB062433.1 Homo sapiens OK/SW-cl.114 mRNA, complete cds PA
AK301739.1 Homo sapiens cDNA FLJ59273 complete cds, highly similar to CDK5 regulatory subunit-associated protein 3 P
AF110322.1 Homo sapiens MSTP016 (MST016) mRNA, complete cds PA
AK300643.1 Homo sapiens cDNA FLJ56403 complete cds, highly similar to CDK5 regulatory subunit-associated protein 3 PA

EST sequences (10 of 1260) [Show all sequences]

AA866083.1 Clone IMAGE:1459544 kidney 3' read A
R16408.1 Clone IMAGE:129291 mixed 5' read P
AI001220.1 Clone IMAGE:1613249 uncharacterized tissue 3' read A
AI027930.1 Clone IMAGE:1645507 testis 3' read A
AI076739.1 Clone IMAGE:1676395 embryonic tissue 3' read A
AI086021.1 Clone IMAGE:1671205 uncharacterized tissue 3' read A
CB047924.1 Clone IMAGE:3270714 prostate 3' read PA
CB047925.1 Clone IMAGE:3270714 prostate 5' read P
AI192783.1 Clone IMAGE:1744076 lung 3' read A
AI217134.1 Clone IMAGE:1753174 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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