> RAN binding protein 2 (RANBP2)
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UGID:161940     UniGene Hs.199561     Homo sapiens (human)   RANBP2 Links
RAN binding protein 2 (RANBP2)

Human protein-coding gene RANBP2. Represented by 548 ESTs from 261 cDNA libraries. Corresponds to reference sequence NM_006267.4. [UniGene 161940 - Hs.199561]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006258.3 RANBP2 gene product H. sapiens 100.0 3223
NP_035370.2 Ranbp2 gene product M. musculus 89.9 3052
NP_001082659.1 peptidylprolyl isomerase A (cyclophilin A) X. laevis 73.9 160
NP_729966.1 CG7768 D. melanogaster 70.2 160
NP_010439.1 peptidylprolyl isomerase CPR1 S. cerevisiae 67.9 158
XP_001700372.1 peptidyl-prolyl cis-trans isomerase, cyclophilin-type C. reinhardtii 66.9 169
NP_195213.1 Peptidyl-prolyl cis-trans isomerase CYP18-4 A. thaliana 66.5 170
NP_506749.1 Protein CYN-7 C. elegans 64.1 169
XP_965017.1 hypothetical protein NCU02614 N. crassa 62.2 171
XP_002663326.2 PREDICTED: e3 SUMO-protein ligase RanBP2 D. rerio 61.2 2957
Other hits (2 of 68) [Show all]SpeciesId(%)Len(aa)
XP_001138683.2 PREDICTED: e3 SUMO-protein ligase RanBP2 isoform 3 P. troglodytes 99.4 3223
XP_003909151.1 PREDICTED: E3 SUMO-protein ligase RanBP2-like, partial P. anubis 97.7 2626

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; uterus; lung; embryonic tissue; uncharacterized tissue; liver; intestine; bladder; heart; adrenal gland; bone marrow; spleen; larynx; trachea; pancreas; mixed; thymus; lymph node; eye; umbilical cord; mammary gland; prostate; kidney; skin; stomach; connective tissue; ovary; blood; pharynx; mouth; pituitary gland; muscle; thyroid; ascites; bone; vascular; esophagus; ear; nerve; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q12.3
UniSTS entry: Chr 2 RH78999
UniSTS entry: Chr 2 RH67924
UniSTS entry: Chr 2 RH18435
UniSTS entry: Chr 2 RH79061
UniSTS entry: Chr 2 RH98799
UniSTS entry: Chr 2 SHGC-145334
UniSTS entry: Chr 2 RH16188
UniSTS entry: Chr 2 SHGC-36406
UniSTS entry: SHGC-37095
UniSTS entry: RH80127
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_006267.4 Homo sapiens RAN binding protein 2 (RANBP2), mRNA P
AY170822.1 Homo sapiens transformation-related protein 1 mRNA, complete cds PA
AB209483.1 Homo sapiens mRNA for RAN binding protein 2 variant protein P
AK025462.1 Homo sapiens cDNA: FLJ21809 fis, clone HEP00942, highly similar to HUMRANBP2 Human mRNA for RanBP2 (Ran-binding protein 2) PA
AK025711.1 Homo sapiens cDNA: FLJ22058 fis, clone HEP10089, highly similar to HUMRANBP2 Human mRNA for RanBP2 (Ran-binding protein 2) PA
AK026993.1 Homo sapiens cDNA: FLJ23340 fis, clone HEP13465, highly similar to HUMRANBP2 Human mRNA for RanBP2 PA
D42063.1 Homo sapiens mRNA for RanBP2 (Ran-binding protein 2), complete cds P
U19248.1 Human Ran binding protein mRNA, partial cds P
U19240.1 Human Ran binding protein mRNA, partial cds P

EST sequences (10 of 548) [Show all sequences]

AA976651.1 Clone IMAGE:1585346 lung 3' read
AA985073.1 Clone IMAGE:1616168 brain 3' read P
AI023629.1 Clone IMAGE:1643654 testis 3' read
AI024159.1 Clone IMAGE:1642956 testis 3' read PA
AI073499.1 Clone IMAGE:1640275 testis 3' read A
AI090846.1 Clone IMAGE:1640200 testis 3' read A
AI092089.1 Clone IMAGE:1690898 mixed 3' read A
AI093295.1 Clone IMAGE:1695331 uterus 3' read A
AI096814.1 Clone IMAGE:1698271 uterus 3' read A
AI146981.1 Clone IMAGE:1698175 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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