> Zinc finger, C3HC-type containing 1 (ZC3HC1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:161158     UniGene Hs.194157     Homo sapiens (human)   ZC3HC1 Order cDNA clone, Links
Zinc finger, C3HC-type containing 1 (ZC3HC1)

Human protein-coding gene ZC3HC1. Represented by 362 ESTs from 188 cDNA libraries. Corresponds to reference sequence NM_016478.3. [UniGene 161158 - Hs.194157]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_057562.3 ZC3HC1 gene product H. sapiens 100.0 501
XP_001156206.2 PREDICTED: nuclear-interacting partner of ALK isoform 2 P. troglodytes 99.8 501
XP_001094530.1 PREDICTED: nuclear-interacting partner of ALK M. mulatta 99.6 501
NP_766323.1 Zc3hc1 gene product M. musculus 88.3 479
NP_001083590.1 NIPA-like protein X. laevis 63.4 464
NP_001070846.1 zc3hc1 gene product D. rerio 55.3 468
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_003896638.1 PREDICTED: nuclear-interacting partner of ALK P. anubis 99.4 501
XP_532428.3 PREDICTED: nuclear-interacting partner of ALK C. lupus familiaris 95.8 501

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; ovary; lymph; prostate; mammary gland; connective tissue; bladder; bone marrow; eye; mixed; uterus; lung; skin; uncharacterized tissue; embryonic tissue; kidney; muscle; pharynx; pineal gland; pancreas; bone; blood; stomach; thymus; liver; esophagus; placenta; intestine; lymph node; heart; cervix; adrenal gland; ascites; thyroid; salivary gland; umbilical cord; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q32.2
UniSTS entry: Chr 7 RH12411
UniSTS entry: Chr 7 ZC3HC1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AJ537494.1 Homo sapiens mRNA for nuclear interacting partner of ALK (NIPA gene) P
AK001317.1 Homo sapiens cDNA FLJ10455 fis, clone NT2RP1001014 P
NM_016478.3 Homo sapiens zinc finger, C3HC-type containing 1 (ZC3HC1), mRNA PA
AK022373.1 Homo sapiens cDNA FLJ12311 fis, clone MAMMA1002011 P
BC000190.1 Homo sapiens zinc finger, C3HC-type containing 1, mRNA (cDNA clone IMAGE:3353218), complete cds PA
BC011551.1 Homo sapiens zinc finger, C3HC-type containing 1, mRNA (cDNA clone MGC:19971 IMAGE:4561164), complete cds PA
BC028917.1 Homo sapiens zinc finger, C3HC-type containing 1, mRNA (cDNA clone IMAGE:4707030), complete cds PA
AF151050.1 Homo sapiens HSPC216 mRNA, complete cds PA

EST sequences (10 of 362) [Show all sequences]

AA977410.1 Clone IMAGE:1590607 kidney 3' read
AA992138.1 Clone IMAGE:1622065 embryonic tissue 3' read A
AI005214.1 Clone IMAGE:1624830 embryonic tissue 3' read A
AI125818.1 Clone IMAGE:1737289 testis 3' read A
AI249434.1 Clone IMAGE:2000192 lymph node 3' read A
CB137494.1 Clone L5HLK1-29-D07 liver 5' read P
AI086891.1 Clone IMAGE:1679563 skin 3' read A
AI274337.1 Clone IMAGE:1875144 intestine 3' read A
R37636.1 Clone IMAGE:26567 brain 3' read A
R39054.1 Clone IMAGE:25102 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help