> Protocadherin 10 (PCDH10)
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UGID:160929     UniGene Hs.192859     Homo sapiens (human)   PCDH10 Order cDNA clone, Links
Protocadherin 10 (PCDH10)

Human protein-coding gene PCDH10. Represented by 258 ESTs from 44 cDNA libraries. EST representation biased toward connective tissue; soft tissue/muscle tissue tumor. Corresponds to 2 reference sequences (different isoforms). [UniGene 160929 - Hs.192859]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001134989.1 PREDICTED: protocadherin-10 isoform 3 P. troglodytes 100.0 1039
NP_116586.1 PCDH10 gene product H. sapiens 100.0 1039
XP_003899241.1 PREDICTED: protocadherin-10-like P. anubis 99.9 1039
NP_001091641.1 protocadherin 10 isoform 3 precursor M. musculus 98.4 1039
NP_878305.1 pcdh10b gene product D. rerio 79.6 1025
NP_001086234.1 protocadherin 8 precursor X. laevis 47.2 533
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003357074.1 PREDICTED: protocadherin-10-like S. scrofa 99.3 895
NP_001178080.1 PCDH10 gene product B. taurus 99.3 1033

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: connective tissue [show more like this]
soft tissue/muscle tissue tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; brain; uncharacterized tissue; kidney; eye; testis; embryonic tissue; placenta; mixed; skin; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q28.3
UniSTS entry: Chr 4 L29660
UniSTS entry: Chr 4 SHGC-24774 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AB037821.1 Homo sapiens mRNA for KIAA1400 protein, partial cds P
AL157470.1 Homo sapiens mRNA; cDNA DKFZp761O2023 (from clone DKFZp761O2023) PA
AK024636.1 Homo sapiens cDNA: FLJ20983 fis, clone CAE00821 PA
BC111560.1 Homo sapiens protocadherin 10, mRNA (cDNA clone MGC:133344 IMAGE:40068151), complete cds P
AY013874.1 Homo sapiens protocadherin 10 (PCDH10) mRNA, complete cds P
NM_032961.1 Homo sapiens protocadherin 10 (PCDH10), transcript variant 1, mRNA PA
NM_020815.1 Homo sapiens protocadherin 10 (PCDH10), transcript variant 2, mRNA P
AK314377.1 Homo sapiens cDNA, FLJ95150, Homo sapiens protocadherin 10 (PCDH10), transcript variant 2, mRNA P

EST sequences (10 of 258) [Show all sequences]

R20439.1 Clone IMAGE:32899 brain 5' read
AA910523.1 Clone IMAGE:1517959 uncharacterized tissue 3' read
AI086968.1 Clone IMAGE:1680129 skin 3' read A
BX089593.1 Clone IMAGp998L14154_;_IMAGE:32899 brain A
AI272206.1 Clone IMAGE:1956078 brain 3' read
AI356008.1 Clone IMAGE:2016749 brain 3' read A
AI360142.1 Clone IMAGE:2018613 brain 3' read A
AI363482.1 Clone IMAGE:2017285 brain 3' read A
AI553815.1 Clone IMAGE:2169034 brain 3' read A
R43559.1 Clone IMAGE:32899 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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