Matrix metallopeptidase 23B (MMP23B)

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:160826 UniGene Hs.192316 Homo sapiens (human) MMP23B

Order cDNA clone, Links

Matrix metallopeptidase 23B (MMP23B)

Human protein-coding gene MMP23B. Represented by 53 ESTs from 33 cDNA libraries. Corresponds to reference sequence NM_006983.1. [UniGene 160826 - Hs.192316]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_008914.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	MMP23B gene product	H. sapiens	100.0	389
XP_001155083.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-23	P. troglodytes	100.0	259
NP_036115.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Mmp23 gene product	M. musculus	90.5	390
NP_001017890.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	mmp23bb gene product	D. rerio	60.2	364
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_001095296.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: matrix metalloproteinase-23	M. mulatta	99.5	389
XP_003891028.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-23	P. anubis	99.2	389

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	kidney; uncharacterized tissue; spleen; mixed; uterus; placenta; prostate; lung; brain; ovary; eye; testis; heart; intestine; ascites; bone; embryonic tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p36.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AB010961.1	Homo sapiens mRNA for MIFR-1, complete cds	P
AF056200.1	Homo sapiens metalloprotease mmp21/22A (MMP21/22) mRNA, complete cds	PA
AJ005256.1	Homo sapiens mRNA for MMP-23	P
NM_006983.1	Homo sapiens matrix metallopeptidase 23B (MMP23B), mRNA	P
BC025719.1	Homo sapiens matrix metallopeptidase 23B, mRNA (cDNA clone MGC:34412 IMAGE:5228894), complete cds	PA
AK297700.1	Homo sapiens cDNA FLJ60714 complete cds, highly similar to Homo sapiens matrix metallopeptidase 23B (MMP23B), mRNA	P

EST sequences (10 of 53) [Show all sequences]

CB048617.1	Clone IMAGE:3271134	prostate	5' read	P
BX096766.1	Clone IMAGp998A084737_;_IMAGE:1930639	lung		P
BX100332.1	Clone IMAGp998J09789_;_IMAGE:345320	heart		P
AI284983.1	Clone IMAGE:1872942	intestine	3' read	P
AI347985.1	Clone IMAGE:1926969	intestine	3' read	P
AI699245.1	Clone IMAGE:2322692	prostate	3' read
CB241847.1	Clone UI-CF-FN0-aga-e-11-0-UI	lung	3' read	PA
BX416915.2	Clone CS0DE002YE21	placenta	5' read	P
BX434034.2	Clone CS0DE002YE21	placenta	3' read	P
AW072298.1	Clone IMAGE:2566903	brain	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria