> BRISC and BRCA1 A complex member 1 (BABAM1)
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UGID:160499     UniGene Hs.190722     Homo sapiens (human)   BABAM1 Order cDNA clone, Links
BRISC and BRCA1 A complex member 1 (BABAM1)

Human protein-coding gene BABAM1. Represented by 667 ESTs from 288 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 160499 - Hs.190722]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001113438.1 PREDICTED: BRCA1-A complex subunit MERIT40-like isoform 2 M. mulatta 100.0 328
XP_003915176.1 PREDICTED: BRISC and BRCA1-A complex member 1 P. anubis 100.0 328
XP_001173509.1 PREDICTED: BRISC and BRCA1-A complex member 1 isoform 4 P. troglodytes 100.0 328
NP_054892.2 BABAM1 gene product H. sapiens 100.0 328
NP_080912.2 BRISC and BRCA1-A complex member 1 M. musculus 96.4 332
NP_001086385.1 BRISC and BRCA1-A complex member 1 X. laevis 79.1 324
NP_001003752.1 babam1 gene product D. rerio 71.4 371
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
NP_001070269.1 BABAM1 gene product B. taurus 98.5 331
XP_004008484.1 PREDICTED: BRISC and BRCA1-A complex member 1 O. aries 98.5 331

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; lung; embryonic tissue; cervix; liver; uncharacterized tissue; mammary gland; eye; uterus; intestine; placenta; muscle; kidney; mixed; pancreas; ovary; pharynx; testis; prostate; lymph; connective tissue; adipose tissue; blood; lymph node; mouth; bone; larynx; thymus; ascites; heart; pituitary gland; vascular; esophagus; thyroid; spleen; stomach; salivary gland; parathyroid; umbilical cord; nerve; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.11
UniSTS entry: Chr 19 RH11746 [Map Viewer]
UniSTS entry: Chr 19 SGC31836 [Map Viewer]
UniSTS entry: Chr 19 A002Q23
UniSTS entry: D19S645E
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 15 RPLP1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AK000578.1 Homo sapiens cDNA FLJ20571 fis, clone REC01040 PA
CR533526.1 Homo sapiens full open reading frame cDNA clone RZPDo834F0119D for gene HSPC142, HSPC142 protein; complete cds, incl. stopcodon P
NM_014173.2 Homo sapiens BRISC and BRCA1 A complex member 1 (BABAM1), transcript variant 2, mRNA P
BC091491.1 Homo sapiens chromosome 19 open reading frame 62, mRNA (cDNA clone MGC:111069 IMAGE:30364624), complete cds PA
AK025970.1 Homo sapiens cDNA: FLJ22317 fis, clone HRC05274, highly similar to AF161491 Homo sapiens HSPC142 mRNA PA
NM_001033549.1 Homo sapiens BRISC and BRCA1 A complex member 1 (BABAM1), transcript variant 1, mRNA P
BC000788.2 Homo sapiens chromosome 19 open reading frame 62, mRNA (cDNA clone MGC:774 IMAGE:3504488), complete cds PA
AL136692.1 Homo sapiens mRNA; cDNA DKFZp564N2378 (from clone DKFZp564N2378) PA
AK225047.1 Homo sapiens mRNA for hypothetical protein LOC29086 variant, clone: adKA03356 PA
BC006244.1 Homo sapiens chromosome 19 open reading frame 62, mRNA (cDNA clone MGC:11295 IMAGE:3947341), complete cds PA
AK308590.1 Homo sapiens cDNA, FLJ98631 P
AK301193.1 Homo sapiens cDNA FLJ52777 complete cds P
AK299493.1 Homo sapiens cDNA FLJ60035 complete cds P
AF161491.1 Homo sapiens HSPC142 mRNA, complete cds PA

EST sequences (10 of 667) [Show all sequences]

AA888163.1 Clone IMAGE:1492117 kidney 3' read A
AA985287.1 Clone IMAGE:1577351 spleen 3' read A
AA993359.1 Clone IMAGE:1621544 testis 3' read A
AA911808.1 Clone IMAGE:1519720 uncharacterized tissue 3' read A
AI004228.1 Clone IMAGE:1625222 embryonic tissue 3' read A
AI028645.1 Clone IMAGE:1644682 testis 3' read A
AA928237.1 Clone IMAGE:1563639 mixed 3' read A
AI034149.1 Clone IMAGE:1646898 parathyroid 3' read A
AI052411.1 Clone IMAGE:1671704 uncharacterized tissue 3' read A
AI075374.1 Clone IMAGE:1682149 skin 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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