> RAP1A, member of RAS oncogene family (RAP1A)
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UGID:160422     UniGene Hs.190334     Homo sapiens (human)   RAP1A Order cDNA clone, Links
RAP1A, member of RAS oncogene family (RAP1A)

Human protein-coding gene RAP1A. Represented by 387 ESTs from 170 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 160422 - Hs.190334]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_663516.1 Rap1a gene product M. musculus 100.0 183
NP_001005765.1 Rap1a gene product R. norvegicus 100.0 183
XP_003220485.1 PREDICTED: ras-related protein Rap-1A-like A. carolinensis 100.0 183
XP_003642773.1 PREDICTED: ras-related protein Rap-1A isoform 1 G. gallus 100.0 183
XP_001106027.1 PREDICTED: ras-related protein Rap-1A M. mulatta 100.0 183
XP_003892432.1 PREDICTED: ras-related protein Rap-1A isoform 1 P. anubis 100.0 183
XP_524793.1 PREDICTED: ras-related protein Rap-1A P. troglodytes 100.0 183
NP_002875.1 RAP1A gene product H. sapiens 100.0 183
XP_863066.1 PREDICTED: ras-related protein Rap-1A isoform 2 C. lupus familiaris 100.0 183
XP_001498681.1 PREDICTED: ras-related protein Rap-1A-like E. caballus 100.0 183
XP_001928684.1 PREDICTED: ras-related protein Rap-1A isoform 1 S. scrofa 100.0 183
NP_776873.1 RAP1A gene product B. taurus 100.0 183
XP_004002369.1 PREDICTED: ras-related protein Rap-1A isoform 1 O. aries 100.0 183
XP_002715821.1 PREDICTED: RAP1A, member of RAS oncogene family O. cuniculus 100.0 183
NP_001002152.1 rap1a gene product D. rerio 98.9 184
NP_001090224.1 RAP1A, member of RAS oncogene family X. laevis 98.9 184
NP_501549.1 Protein RAP-1 C. elegans 94.2 187
NP_476857.1 roughened, isoform A D. melanogaster 93.5 183
NP_011668.3 Rsr1p S. cerevisiae 61.6 216
XP_961863.2 GTPase NRas precursor N. crassa 57.6 170
Other hits (2 of 40) [Show all]SpeciesId(%)Len(aa)
NP_001120850.1 RAP1A gene product T. guttata 99.5 183
XP_003438963.1 PREDICTED: ras-related protein Rap-1b-like O. niloticus 98.9 184

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; uncharacterized tissue; lung; mixed; pharynx; embryonic tissue; vascular; cervix; thyroid; pituitary gland; kidney; pancreas; liver; testis; stomach; prostate; uterus; blood; skin; connective tissue; intestine; lymph node; trachea; ear; lymph; heart; ascites; bone; eye; muscle; mammary gland; bone marrow; adipose tissue; nerve; umbilical cord; ovary; parathyroid; adrenal gland; salivary gland; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.3
UniSTS entry: Chr 1 SHGC-141
UniSTS entry: Chr 1 D1S3458
UniSTS entry: Chr 17 Rap1a
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

M22995.1 Human ras-related protein (Krev-1) mRNA, complete cds P
NM_002884.2 Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), transcript variant 2, mRNA P
BT019666.1 Homo sapiens RAP1A, member of RAS oncogene family mRNA, complete cds P
NM_001010935.1 Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), transcript variant 1, mRNA P
BC014086.2 Homo sapiens RAP1A, member of RAS oncogene family, mRNA (cDNA clone MGC:20027 IMAGE:4422971), complete cds PA
AK293044.1 Homo sapiens cDNA FLJ75985 complete cds, highly similar to Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), transcript variant 2, mRNA P
AF493912.1 Homo sapiens Ras family small GTP binding protein RAP1A (RAP1A) mRNA, complete cds P
AB451360.1 Homo sapiens RAP1A mRNA for Ras-related protein Rap-1A precursor, partial cds, clone: FLJ08033AAAF P
AB451235.1 Homo sapiens RAP1A mRNA for Ras-related protein Rap-1A precursor, complete cds, clone: FLJ08033AAAN P
X12533.1 Human rap1A mRNA for ras-related protein P

EST sequences (10 of 387) [Show all sequences]

AA954442.1 Clone IMAGE:1563495 mixed 3' read A
AA971360.1 Clone IMAGE:1583138 mixed 3' read A
AA987646.1 Clone IMAGE:1604346 lung 3' read A
AA994722.1 Clone IMAGE:1625489 mixed 3' read
AI004326.1 Clone IMAGE:1631876 mammary gland 3' read
AI079229.1 Clone IMAGE:1678929 skin 3' read
AI090284.1 Clone IMAGE:1697620 uterus 3' read A
AI094819.1 Clone IMAGE:1687077 brain 3' read A
AI127741.1 Clone IMAGE:1711190 uterus 3' read A
AI142969.1 Clone IMAGE:1680650 skin 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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