> Haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:159729     UniGene Hs.185910     Homo sapiens (human)   HDHD1 Order cDNA clone, Links
Haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1)

Human protein-coding gene HDHD1. Represented by 293 ESTs from 146 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 159729 - Hs.185910]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001129037.1 HDHD1 gene product H. sapiens 100.0 250
NP_001018451.1 hdhd1 gene product D. rerio 73.7 213
NP_001089799.2 haloacid dehalogenase-like hydrolase domain containing 1 X. laevis 73.6 230
NP_080384.2 pseudouridine-5'-monophosphatase M. musculus 73.4 222
NP_477228.1 GS1-like, isoform A D. melanogaster 56.6 221
NP_568858.1 haloacid dehalogenase-like hydrolase domain-containing protein A. thaliana 50.2 235
XP_001697643.1 hypothetical protein CHLREDRAFT_120305 C. reinhardtii 48.2 218
Other hits (2 of 49) [Show all]SpeciesId(%)Len(aa)
XP_001089095.1 PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 1A-like isoform 2 M. mulatta 98.2 226
XP_003917425.1 PREDICTED: pseudouridine-5'-monophosphatase-like isoform 1 P. anubis 97.4 226

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; mixed; lung; kidney; uncharacterized tissue; testis; liver; pharynx; adrenal gland; connective tissue; heart; uterus; blood; bladder; umbilical cord; skin; eye; thyroid; intestine; mammary gland; bone; trachea; mouth; tonsil; thymus; ascites; ovary; lymph node; muscle; vascular; embryonic tissue; stomach; prostate; spleen; bone marrow; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp22.32
UniSTS entry: Chr X G62133
UniSTS entry: Chr X DXS7967
UniSTS entry: Chr X HDHD1A
UniSTS entry: Chr X RH1709
UniSTS entry: Chr X D1S1163
UniSTS entry: Chr X DXS9742
UniSTS entry: GDB:187813
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_012080.4 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1), transcript variant 2, mRNA PA
AK223405.1 Homo sapiens mRNA for haloacid dehalogenase-like hydrolase domain containing 1A variant, clone: FCC108C12 P
M86934.1 Human GS1 (protein of unknown function) mRNA, complete cds P
BC012494.1 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 1A, mRNA (cDNA clone MGC:21172 IMAGE:4478358), complete cds PA
AK313155.1 Homo sapiens cDNA, FLJ93648 P
AK307088.1 Homo sapiens cDNA, FLJ97036 P
AK300985.1 Homo sapiens cDNA FLJ53103 complete cds, moderately similar to Haloacid dehalogenase-like hydrolasedomain-containing protein 1A P
NM_001135565.1 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1), transcript variant 1, mRNA PA
AK300740.1 Homo sapiens cDNA FLJ51700 complete cds, highly similar to Haloacid dehalogenase-like hydrolasedomain-containing protein 1A P
NM_001178136.1 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1), transcript variant 4, mRNA PA
NM_001178135.1 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 1 (HDHD1), transcript variant 3, mRNA P

EST sequences (10 of 293) [Show all sequences]

AA897577.1 Clone IMAGE:1508798 mixed 3' read
AA991212.1 Clone IMAGE:1606323 kidney 3' read A
AI023687.1 Clone IMAGE:1654214 mixed 3' read A
AI091555.1 Clone IMAGE:1651091 mixed 3' read A
AI128341.1 Clone IMAGE:1714638 placenta 3' read A
AI139516.1 Clone IMAGE:1710637 uterus 3' read A
AI142626.1 Clone IMAGE:1509946 mixed 3' read A
BX112318.1 Clone IMAGp998B2070_;_IMAGE:22170 brain A
AI188494.1 Clone IMAGE:1723214 placenta 3' read A
CB163014.1 Clone L18POOL1n1-44-C02 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help