> Transmembrane protein 9 (TMEM9)
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UGID:159248     UniGene Hs.181444     Homo sapiens (human)   TMEM9 Order cDNA clone, Links
Transmembrane protein 9 (TMEM9)

Human protein-coding gene TMEM9. Represented by 812 ESTs from 307 cDNA libraries. Corresponds to reference sequence NM_016456.3. [UniGene 159248 - Hs.181444]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003893373.1 PREDICTED: transmembrane protein 9 isoform 1 P. anubis 100.0 182
NP_057540.1 TMEM9 gene product H. sapiens 100.0 182
XP_003308720.1 PREDICTED: transmembrane protein 9-like, partial P. troglodytes 100.0 179
NP_001099423.1 Tmem9 gene product R. norvegicus 100.0 121
XP_001109197.2 PREDICTED: transmembrane protein 9 isoform 7 M. mulatta 99.5 209
NP_079715.1 Tmem9 gene product M. musculus 99.5 182
NP_956160.1 tmem9 gene product D. rerio 80.5 184
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001494424.1 PREDICTED: transmembrane protein 9-like E. caballus 98.4 182
XP_003639223.1 PREDICTED: transmembrane protein 9-like C. lupus familiaris 97.8 181

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; testis; lung; mixed; eye; uncharacterized tissue; prostate; intestine; uterus; kidney; ovary; liver; pancreas; placenta; cervix; blood; adipose tissue; mammary gland; bladder; salivary gland; adrenal gland; larynx; thyroid; parathyroid; umbilical cord; ascites; bone; heart; muscle; bone marrow; skin; mouth; connective tissue; pituitary gland; pharynx; stomach; thymus; lymph node; esophagus; nerve; ganglia; epididymis; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
UniSTS entry: Chr 1 HSC2QF012 [Map Viewer]
UniSTS entry: Chr 1 WI-11986 [Map Viewer]
UniSTS entry: Chr 1 RH76360
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AY359012.1 Homo sapiens clone DNA60278 TMEM9 (UNQ631) mRNA, complete cds P
CR457162.1 Homo sapiens full open reading frame cDNA clone RZPDo834D078D for gene TMEM9, transmembrane protein 9; complete cds, incl. stopcodon P
CR533467.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0517D for gene TMEM9, transmembrane protein 9; complete cds, incl. stopcodon P
NM_016456.3 Homo sapiens transmembrane protein 9 (TMEM9), mRNA PA
BC001106.2 Homo sapiens transmembrane protein 9, mRNA (cDNA clone MGC:891 IMAGE:3506442), complete cds PA
AL136600.1 Homo sapiens mRNA; cDNA DKFZp564I1216 (from clone DKFZp564I1216) PA
AK054883.1 Homo sapiens cDNA FLJ30321 fis, clone BRACE2006281 P
AB013909.1 Homo sapiens mRNA for dermal papilla derived protein 4 (DERP4), complete cds P
AK094588.1 Homo sapiens cDNA FLJ37269 fis, clone BRAMY2011679 P
AK091726.1 Homo sapiens cDNA FLJ34407 fis, clone HEART1000173 P
AK303843.1 Homo sapiens cDNA FLJ54226 complete cds, highly similar to Transmembrane protein 9 precursor P
AK296307.1 Homo sapiens cDNA FLJ59912 complete cds, moderately similar to Transmembrane protein 9 precursor P
AK075335.1 Homo sapiens cDNA PSEC0012 fis, clone NT2RM1000853, highly similar to Transmembrane protein 9 precursor P
AF151020.1 Homo sapiens HSPC186 mRNA, complete cds PA
AY138587.1 Homo sapiens transmembrane protein 9 precursor (TMEM9) mRNA, complete cds P

EST sequences (10 of 812) [Show all sequences]

AA865035.1 Clone IMAGE:1459480 kidney 3' read A
AA962569.1 Clone IMAGE:1553634 kidney 3' read A
AA922296.1 Clone IMAGE:1474264 intestine 3' read A
AA985583.1 Clone IMAGE:1601211 lung 3' read P
AA988310.1 Clone IMAGE:1607031 mammary gland 3' read A
AA903661.1 Clone IMAGE:1518673 uncharacterized tissue 3' read A
AI022738.1 Clone IMAGE:1654190 mixed 3' read A
AI027843.1 Clone IMAGE:1671608 uncharacterized tissue 3' read A
AI034167.1 Clone IMAGE:1656134 mixed 3' read P
AI053813.1 Clone IMAGE:1861887 ovary 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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