> High mobility group nucleosomal binding domain 2 (HMGN2)
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UGID:159210     UniGene Hs.181163     Homo sapiens (human)   HMGN2 Order cDNA clone, Links
High mobility group nucleosomal binding domain 2 (HMGN2)

Human protein-coding gene HMGN2. Represented by 2543 ESTs from 488 cDNA libraries. Corresponds to reference sequence NM_005517.3. [UniGene 159210 - Hs.181163]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001003101.1 HMGN2 gene product C. lupus familiaris 98.9 89
XP_003364480.1 PREDICTED: non-histone chromosomal protein HMG-17-like E. caballus 98.9 89
NP_001231043.1 HMGN2 gene product S. scrofa 98.9 89
NP_001092415.1 HMGN2 gene product B. taurus 98.9 89
XP_004019712.1 PREDICTED: non-histone chromosomal protein HMG-17-like O. aries 98.9 89
XP_003946212.1 PREDICTED: non-histone chromosomal protein HMG-17-like M. musculus 97.8 89
XP_003846738.1 PREDICTED: non-histone chromosomal protein HMG-17-like H. sapiens 95.3 105
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_002728447.1 PREDICTED: hypothetical protein R. norvegicus 97.8 89
XP_001363699.1 PREDICTED: non-histone chromosomal protein HMG-17-like M. domestica 97.8 89

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; lung; brain; uncharacterized tissue; uterus; eye; skin; intestine; liver; placenta; pancreas; muscle; lymph; testis; kidney; prostate; mixed; bone; pharynx; ovary; mammary gland; cervix; blood; lymph node; connective tissue; stomach; thymus; tonsil; ascites; spleen; heart; bladder; salivary gland; bone marrow; adrenal gland; esophagus; vascular; pituitary gland; adipose tissue; pineal gland; mouth; ear; nerve; parathyroid; thyroid; peritoneum; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.1
UniSTS entry: Chr 15 ECD09439
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

NM_005517.3 Homo sapiens high mobility group nucleosomal binding domain 2 (HMGN2), mRNA PA
BC061898.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:3452912) PA
BC064347.1 Homo sapiens cDNA clone IMAGE:4516246 PA
BC000378.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:8383 IMAGE:2820349), complete cds PA
BC003050.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:750 IMAGE:3543809), complete cds PA
BC070297.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88292 IMAGE:4282630), complete cds PA
BC072011.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88721 IMAGE:6647282), complete cds PA
BC071707.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:87991 IMAGE:3849426), complete cds PA
BC072010.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88720 IMAGE:6273507), complete cds PA
CR542122.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0523D for gene HMGN2, high-mobility group nucleosomal binding domain 2; complete cds, incl. stopcodon P
BC075837.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88719 IMAGE:6272425), complete cds PA
BC081567.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88718 IMAGE:4131303), complete cds PA
M12623.1 Human non-histone chromosomal protein HMG-17 mRNA, complete cds P
AK026562.1 Homo sapiens cDNA: FLJ22909 fis, clone KAT05694, highly similar to HUMHMG17 Human non-histone chromosomal protein HMG-17 mRNA PA
BC110390.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:102817 IMAGE:5190365), complete cds PA
BC014644.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:15731 IMAGE:3355317), complete cds PA
BC032140.2 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:29711 IMAGE:5021546), complete cds PA
BC007124.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:3463052) PA
BC003689.1 Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:3455121) PA
BC020307.1 Homo sapiens cDNA clone IMAGE:4993977 PA

EST sequences (10 of 2543) [Show all sequences]

AA954205.1 Clone IMAGE:1575085 kidney 3' read A
AA961878.1 Clone IMAGE:1598696 uncharacterized tissue 3' read A
AA906384.1 Clone IMAGE:1506425 mixed 3' read A
AA970765.1 Clone IMAGE:1576484 intestine 3' read A
AA974209.1 Clone IMAGE:1586740 uncharacterized tissue 3' read A
AA974779.1 Clone IMAGE:1587878 uncharacterized tissue 3' read A
AA983379.1 Clone IMAGE:1592737 kidney 3' read A
AA983486.1 Clone IMAGE:1598833 uncharacterized tissue 3' read A
AA991947.1 Clone IMAGE:1613485 uncharacterized tissue 3' read A
AA991988.1 Clone IMAGE:1613581 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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