> Ubiquitin-conjugating enzyme E2, J1 (UBE2J1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:156669     UniGene Hs.163776     Homo sapiens (human)   UBE2J1 Order cDNA clone, Links
Ubiquitin-conjugating enzyme E2, J1 (UBE2J1)

Human protein-coding gene UBE2J1. Represented by 562 ESTs from 230 cDNA libraries. Corresponds to reference sequence NM_016021.2. [UniGene 156669 - Hs.163776]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_518636.2 PREDICTED: ubiquitin-conjugating enzyme E2 J1 P. troglodytes 100.0 317
NP_057105.2 UBE2J1 gene product H. sapiens 100.0 317
XP_001096217.1 PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform 1 M. mulatta 99.7 317
XP_003897951.1 PREDICTED: ubiquitin-conjugating enzyme E2 J1 P. anubis 99.7 317
NP_062532.2 ubiquitin-conjugating enzyme E2 J1 M. musculus 97.8 317
NP_001091402.1 ubiquitin-conjugating enzyme E2, J1 X. laevis 89.7 301
NP_999932.1 ube2j1 gene product D. rerio 84.4 313
XP_001699437.1 hypothetical protein CHLREDRAFT_185318 C. reinhardtii 65.8 149
NP_566563.1 ubiquitin-conjugating enzyme E2 32 A. thaliana 65.3 147
NP_001040755.1 Protein UBC-6, isoform a C. elegans 61.7 303
XP_960746.1 hypothetical protein NCU01268 N. crassa 55.6 178
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
NP_001070687.1 UBE2J1 gene product S. scrofa 98.4 317
NP_001193115.1 ubiquitin-conjugating enzyme E2 J1 B. taurus 98.4 317

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lymph node; mixed; brain; uncharacterized tissue; lung; skin; placenta; uterus; embryonic tissue; blood; testis; eye; kidney; salivary gland; connective tissue; heart; pancreas; mammary gland; vascular; intestine; ovary; amniotic fluid; bone; pharynx; thymus; liver; prostate; bone marrow; muscle; bladder; stomach; lymph; tonsil; pineal gland; umbilical cord; thyroid; parathyroid; trachea; cervix; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q15
UniSTS entry: Chr 6 RH47544
UniSTS entry: Chr 6 WI-11949 [Map Viewer]
UniSTS entry: Chr 6 SHGC-56767
UniSTS entry: Chr 6 RH104315
UniSTS entry: Chr 6 D6S1202E [Map Viewer]
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AJ245898.1 Homo sapiens mRNA for Non-Canonical UBiquitin Conjugating Enzyme 1(NCUBE1) P
NM_016021.2 Homo sapiens ubiquitin-conjugating enzyme E2, J1 (UBE2J1), mRNA PA
U93243.1 Homo sapiens Ubc6p homolog mRNA, complete cds PA
AF151834.1 Homo sapiens CGI-76 protein mRNA, complete cds P
AK223464.1 Homo sapiens mRNA for ubiquitin-conjugating enzyme E2, J1 variant, clone: FCC117D01 PA
AB075487.1 Homo sapiens neuroblastoma cDNA, clone:Nbla00119, full insert sequence
BC013973.1 Homo sapiens ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast), mRNA (cDNA clone MGC:12555 IMAGE:4137664), complete cds PA
AJ420600.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 684268 A
AJ420578.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1658099 PA
AJ420522.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1998380 A
AK290574.1 Homo sapiens cDNA FLJ76258 complete cds, highly similar to Homo sapiens ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) (UBE2J1), mRNA P
AK300629.1 Homo sapiens cDNA FLJ52165 complete cds, highly similar to Ubiquitin-conjugating enzyme E2 J1 (EC 6.3.2.19) P
AJ420479.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1654446 A
AF151039.1 Homo sapiens HSPC205 mRNA, complete cds P
AF161502.1 Homo sapiens HSPC153 mRNA, complete cds PA

EST sequences (10 of 562) [Show all sequences]

AA906348.1 Clone IMAGE:1505951 mixed 3' read A
AA975459.1 Clone IMAGE:1558184 lung 3' read A
AA922932.1 Clone IMAGE:1457428 intestine 3' read
AI014617.1 Clone IMAGE:1628758 mixed 3' read P
AI017930.1 Clone IMAGE:1629077 mixed 3' read P
AA928247.1 Clone IMAGE:1563659 mixed 3' read P
AI033145.1 Clone IMAGE:1654446 mixed 3' read A
AI039256.1 Clone IMAGE:1658099 embryonic tissue 3' read A
AI128490.1 Clone IMAGE:1711991 uterus 3' read P
R23498.1 Clone IMAGE:132147 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help