> Protein kinase C and casein kinase substrate in neurons 2 (PACSIN2)
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UGID:156501     UniGene Hs.162877     Homo sapiens (human)   PACSIN2 Order cDNA clone, Links
Protein kinase C and casein kinase substrate in neurons 2 (PACSIN2)

Human protein-coding gene PACSIN2. Represented by 628 ESTs from 228 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 156501 - Hs.162877]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_009160.2 PACSIN2 gene product H. sapiens 100.0 485
XP_003905703.1 PREDICTED: protein kinase C and casein kinase substrate in neurons protein 2 isoform 1 P. anubis 99.6 485
XP_001171459.1 PREDICTED: protein kinase C and casein kinase substrate in neurons protein 2 isoform 10 P. troglodytes 99.6 485
NP_001152981.1 Pacsin2 gene product M. musculus 96.3 485
NP_001081950.1 protein kinase C and casein kinase substrate in neurons protein 2 X. laevis 85.1 476
NP_996952.1 pacsin2 gene product D. rerio 72.1 486
NP_788697.1 syndapin, isoform B D. melanogaster 51.7 296
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_002798430.1 PREDICTED: protein kinase C and casein kinase substrate in neurons protein 2-like M. mulatta 99.1 445
XP_002723693.1 PREDICTED: protein kinase C and casein kinase substrate in neurons 2-like O. cuniculus 96.2 466

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; ascites; skin; lung; blood; embryonic tissue; intestine; connective tissue; stomach; pancreas; eye; kidney; testis; mixed; lymph; placenta; mouth; mammary gland; bone marrow; uterus; prostate; heart; liver; nerve; uncharacterized tissue; muscle; parathyroid; pituitary gland; lymph node; bone; cervix; thyroid; larynx; salivary gland; adipose tissue; ganglia; ovary; vascular; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.2-q13.33
UniSTS entry: Chr 22 G20629
UniSTS entry: Chr 22 A005Z33 [Map Viewer]
UniSTS entry: Chr 22 BARC0039
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_007229.3 Homo sapiens protein kinase C and casein kinase substrate in neurons 2 (PACSIN2), transcript variant 2, mRNA PA
CR456536.1 Homo sapiens PACSIN2 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.PACSIN2.V3) P
CR533523.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0319D for gene PACSIN2, protein kinase C and casein kinase substrate in neurons 2; complete cds, incl. stopcodon P
AL389984.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 50687 PA
AF128536.1 Homo sapiens cytoplasmic phosphoprotein PACSIN2 mRNA, complete cds P
AK025107.1 Homo sapiens cDNA: FLJ21454 fis, clone COL04629 A
AY007086.1 Homo sapiens clone TCCCIA00017 mRNA sequence A
AL136845.1 Homo sapiens mRNA; cDNA DKFZp434H1130 (from clone DKFZp434H1130) PA
BC008037.2 Homo sapiens protein kinase C and casein kinase substrate in neurons 2, mRNA (cDNA clone MGC:1214 IMAGE:2967052), complete cds PA
NM_001184971.1 Homo sapiens protein kinase C and casein kinase substrate in neurons 2 (PACSIN2), transcript variant 3, mRNA P
NM_001184970.1 Homo sapiens protein kinase C and casein kinase substrate in neurons 2 (PACSIN2), transcript variant 1, mRNA P

EST sequences (10 of 628) [Show all sequences]

AA968656.1 Clone IMAGE:1592256 kidney 3' read A
AA987544.1 Clone IMAGE:1605088 lung 3' read
AI002168.1 Clone IMAGE:1593106 kidney 3' read
AI023664.1 Clone IMAGE:1651926 mixed 3' read
AI024861.1 Clone IMAGE:1639730 testis 3' read
AI077600.1 Clone IMAGE:1666946 skin 3' read A
AI093328.1 Clone IMAGE:1695073 uterus 3' read A
AI097103.1 Clone IMAGE:1685649 brain 3' read A
AI129803.1 Clone IMAGE:1712964 uterus 3' read A
CB043851.1 Clone IMAGE:3217464 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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