> Unconventional SNARE in the ER 1 homolog (S. cerevisiae) (USE1)
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UGID:133535     UniGene Hs.16187     Homo sapiens (human)   USE1 Order cDNA clone, Links
Unconventional SNARE in the ER 1 homolog (S. cerevisiae) (USE1)

Human protein-coding gene USE1. Represented by 118 ESTs from 73 cDNA libraries. Corresponds to reference sequence NM_018467.3. [UniGene 133535 - Hs.16187]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003915172.1 PREDICTED: vesicle transport protein USE1 P. anubis 100.0 258
XP_512478.1 PREDICTED: vesicle transport protein USE1 isoform 4 P. troglodytes 100.0 258
NP_060937.1 USE1 gene product H. sapiens 100.0 258
XP_001113229.1 PREDICTED: vesicle transport protein USE1-like isoform 4 M. mulatta 99.6 258
NP_080193.1 Use1 gene product M. musculus 91.7 263
NP_001090159.1 unconventional SNARE in the ER 1 homolog X. laevis 74.5 258
NP_956618.1 use1 gene product D. rerio 68.6 257
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_003123539.1 PREDICTED: vesicle transport protein USE1-like isoform 1 S. scrofa 97.1 272
XP_004008486.1 PREDICTED: vesicle transport protein USE1 O. aries 96.9 259

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; prostate; embryonic tissue; eye; uncharacterized tissue; muscle; mammary gland; thyroid; ovary; thymus; skin; lung; kidney; stomach; connective tissue; liver; ascites; testis; tonsil; intestine; uterus; placenta; bone; cervix; lymph node; blood; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.11
UniSTS entry: Chr 19 WI-11338 [Map Viewer]
UniSTS entry: Chr 1 D1S1423
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AB097050.1 Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM26 PA
NM_018467.3 Homo sapiens unconventional SNARE in the ER 1 homolog (S. cerevisiae) (USE1), mRNA PA
AF220052.1 Homo sapiens uncharacterized hematopoietic stem/progenitor cells protein MDS032 mRNA, complete cds PA
BC006005.1 Homo sapiens unconventional SNARE in the ER 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:14828 IMAGE:4279653), complete cds PA
BC008455.1 Homo sapiens unconventional SNARE in the ER 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:14702 IMAGE:4247241), complete cds PA

EST sequences (10 of 118) [Show all sequences]

AA976688.1 Clone IMAGE:1585534 lung 3' read PA
AI027564.1 Clone IMAGE:1668855 brain 3' read PA
AI041625.1 Clone IMAGE:1663836 skin 3' read P
AI139901.1 Clone IMAGE:1737887 testis 3' read PA
AI086150.1 Clone IMAGE:1677808 mixed 3' read PA
BX107181.1 Clone IMAGp998L07373_;_IMAGE:195990 mixed P
AI186062.1 Clone IMAGE:1742453 lung 3' read PA
AA888099.1 Clone IMAGE:1160499 intestine 3' read A
AI344442.1 Clone IMAGE:1917384 kidney 3' read PA
AI361419.1 Clone IMAGE:2014064 brain 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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