> Tumor necrosis factor receptor superfamily, member 13B (TNFRSF13B)
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UGID:155292     UniGene Hs.158341     Homo sapiens (human)   TNFRSF13B Order cDNA clone, Links
Tumor necrosis factor receptor superfamily, member 13B (TNFRSF13B)

Human protein-coding gene TNFRSF13B. Represented by 16 ESTs from 9 cDNA libraries. EST representation biased toward lymphoma. Corresponds to reference sequence NM_012452.2. [UniGene 155292 - Hs.158341]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_036584.1 TNFRSF13B gene product H. sapiens 100.0 292
XP_001161361.2 PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 13B isoform 3 P. troglodytes 99.7 292
NP_067324.1 Tnfrsf13b gene product M. musculus 57.5 247
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003912441.1 PREDICTED: tumor necrosis factor receptor superfamily member 13B P. anubis 95.6 292
XP_001088700.2 PREDICTED: tumor necrosis factor receptor superfamily member 13B M. mulatta 95.1 246

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: lymphoma [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: spleen; trachea; uncharacterized tissue; thymus; lymph; intestine; blood; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17p11.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY302137.1 Homo sapiens transmembrane activator and CAML interactor (TNFRSF13B) mRNA, complete cds; alternatively spliced P
NM_012452.2 Homo sapiens tumor necrosis factor receptor superfamily, member 13B (TNFRSF13B), mRNA PA
AK223453.1 Homo sapiens mRNA for tumor necrosis factor receptor 13B variant, clone: FCC114F06 P
BC109392.1 Homo sapiens tumor necrosis factor receptor superfamily, member 13B, mRNA (cDNA clone MGC:133214 IMAGE:40030781), complete cds P
AK313302.1 Homo sapiens cDNA, FLJ93815, highly similar to Homo sapiens tumor necrosis factor receptor superfamily, member 13B (TNFRSF13B), mRNA P
AK097261.1 Homo sapiens cDNA FLJ39942 fis, clone SPLEN2023024, highly similar to Macaca mulatta transmembrane activator (NF-AT) mRNA P
AK301032.1 Homo sapiens cDNA FLJ52770 complete cds, highly similar to Tumor necrosis factor receptor superfamily member 13B P
AF023614.1 Homo sapiens transmembrane activator and CAML interactor (TACI) mRNA, complete cds PA

EST sequences (10 of 16) [Show all sequences]

CR735610.1 Clone IMAGp958N072093_;_IMAGE:5924166 lymph 5' read P
BP260418.1 Clone HSI00167 intestine 5' read P
BP270564.1 Clone KAR02611 intestine 5' read P
DR006818.1 Clone TC115358 spleen 5' read P
DA943456.1 Clone SPLEN2018355 spleen 5' read P
DA947069.1 Clone SPLEN2023024 spleen 5' read
DB219972.1 Clone TRACH3010157 trachea 5' read P
DB333577.1 Clone SPLEN2023024 spleen 3' read A
AU099378.1 Clone HSI00167 uncharacterized tissue 5' read P
DC407729.1 Clone THYMU3002410 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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