> Carbohydrate (chondroitin 6) sulfotransferase 3 (CHST3)
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UGID:155264     UniGene Hs.158304     Homo sapiens (human)   CHST3 Order cDNA clone, Links
Carbohydrate (chondroitin 6) sulfotransferase 3 (CHST3)

Human protein-coding gene CHST3. Represented by 185 ESTs from 96 cDNA libraries. Corresponds to reference sequence NM_004273.4. [UniGene 155264 - Hs.158304]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_521690.1 PREDICTED: carbohydrate sulfotransferase 3 P. troglodytes 100.0 478
NP_004264.2 CHST3 gene product H. sapiens 100.0 478
NP_058083.2 Chst3 gene product M. musculus 87.8 476
NP_001139043.1 uncharacterized protein LOC559721 precursor D. rerio 60.5 413
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_001106464.2 PREDICTED: carbohydrate sulfotransferase 3-like M. mulatta 99.2 482
XP_003903855.1 PREDICTED: carbohydrate sulfotransferase 3 P. anubis 99.2 482

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; brain; testis; mixed; bone; ovary; embryonic tissue; skin; eye; mammary gland; kidney; lung; vascular; prostate; muscle; uterus; intestine; mouth; placenta; umbilical cord; thymus; trachea; thyroid; connective tissue; esophagus; stomach; larynx; lymph; pancreas; uncharacterized tissue; salivary gland; adipose tissue; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q22.1
UniSTS entry: Chr 10 RH65787
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AB012192.1 Homo sapiens mRNA for chondroitin 6-sulfotransferase, complete cds P
AB017915.1 Homo sapiens mRNA for chondroitin 6-sulfotransferase, complete cds P
NM_004273.4 Homo sapiens carbohydrate (chondroitin 6) sulfotransferase 3 (CHST3), mRNA P
BC093690.1 Homo sapiens carbohydrate (chondroitin 6) sulfotransferase 3, mRNA (cDNA clone MGC:120725 IMAGE:7939535), complete cds P
AK025251.1 Homo sapiens cDNA: FLJ21598 fis, clone COL07134, highly similar to AB017915 Homo sapiens mRNA for condoroitin 6-sulfotransferase A
BC104856.1 Homo sapiens carbohydrate (chondroitin 6) sulfotransferase 3, mRNA (cDNA clone MGC:132516 IMAGE:8143859), complete cds P
BC033183.1 Homo sapiens carbohydrate (chondroitin 6) sulfotransferase 3, mRNA (cDNA clone IMAGE:4587082), with apparent retained intron A

EST sequences (10 of 185) [Show all sequences]

AI041015.1 Clone IMAGE:1642558 testis 3' read
AI077435.1 Clone IMAGE:1677492 mixed 3' read A
AI077920.1 Clone IMAGE:1665901 skin 3' read A
AI088719.1 Clone IMAGE:1686936 brain 3' read A
AI083573.1 Clone IMAGE:1660782 mixed 3' read A
CB157152.1 Clone L12JSHC0s1-8-H07 liver 5' read
AI086878.1 Clone IMAGE:1679556 skin 3' read A
AI366100.1 Clone IMAGE:1952854 brain 3' read
AI375240.1 Clone IMAGE:2063491 mixed 3' read A
AI421756.1 Clone IMAGE:2098570 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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