Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (KCNN1)

Restricted Expression:

infant [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

brain; uncharacterized tissue; eye; vascular; stomach

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:155228 UniGene Hs.158173 Homo sapiens (human) KCNN1

Order cDNA clone, Links

Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (KCNN1)

Human protein-coding gene KCNN1. Represented by 32 ESTs from 21 cDNA libraries. EST representation biased toward infant. Corresponds to reference sequence NM_002248.4. [UniGene 155228 - Hs.158173]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001173773.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: small conductance calcium-activated potassium channel protein 1 isoform 3	P. troglodytes	100.0	542
NP_002239.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	KCNN1 gene product	H. sapiens	100.0	542
XP_003915209.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: small conductance calcium-activated potassium channel protein 1 isoform 1	P. anubis	99.6	542
NP_115773.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Kcnn1 gene product	M. musculus	87.9	537
NP_001121720.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	small conductance calcium-activated potassium channel protein 1	D. rerio	85.6	492
NP_726989.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	small conductance calcium-activated potassium channel, isoform H	D. melanogaster	66.8	424
NP_001021087.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein KCNL-2, isoform d	C. elegans	48.7	419
Other hits (2 of 34) [Show all]		Species	Id(%)	Len(aa)
XP_001115129.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: small conductance calcium-activated potassium channel protein 1	M. mulatta	99.3	443
XP_541945.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: small conductance calcium-activated potassium channel protein 1	C. lupus familiaris	96.0	542

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	19
Map position:	19p13.1
UniSTS entry:	Chr 19	SHGC-30545	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_002248.4	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (KCNN1), mRNA	P
BC075037.2	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, mRNA (cDNA clone MGC:104011 IMAGE:30915422), complete cds	P
U69883.2	Homo sapiens small-conductance, calcium-activated potassium channel SK1 (KCNN1) mRNA, complete cds	P

EST sequences (10 of 32) [Show all sequences]

BX106650.1	Clone IMAGp998A194959_;_IMAGE:2015898	brain		P
AI363154.1	Clone IMAGE:2015898	brain	3' read	A
AI825516.1	Clone IMAGE:2305979	uncharacterized tissue	3' read
AI937237.1	Clone IMAGE:2467542	brain	3' read	A
BX393926.2	Clone CS0DC006YD07	uncharacterized tissue	5' read	P
F11363.1	Clone c-2vh04	brain		P
F09023.1	Clone c-2vh04	brain	3' read
AW292489.1	Clone IMAGE:2725278	uncharacterized tissue	3' read	A
AW594619.1	Clone IMAGE:2950701	uncharacterized tissue	3' read
BE504989.1	Clone IMAGE:3210038	uncharacterized tissue	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria