> Reticulon 4 interacting protein 1 (RTN4IP1)
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UGID:154583     UniGene Hs.155839     Homo sapiens (human)   RTN4IP1 Order cDNA clone, Links
Reticulon 4 interacting protein 1 (RTN4IP1)

Human protein-coding gene RTN4IP1. Represented by 99 ESTs from 64 cDNA libraries. Corresponds to reference sequence NM_032730.4. [UniGene 154583 - Hs.155839]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_116119.2 RTN4IP1 gene product H. sapiens 100.0 395
XP_001145925.2 PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform 2 P. troglodytes 99.8 395
NP_570962.2 Rtn4ip1 gene product M. musculus 93.2 395
NP_956646.1 rtn4ip1 gene product D. rerio 74.3 354
NP_001091139.1 reticulon 4 interacting protein 1 X. laevis 72.1 366
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_002714919.1 PREDICTED: reticulon 4 interacting protein 1 O. cuniculus 96.7 395
XP_003898019.1 PREDICTED: LOW QUALITY PROTEIN: reticulon-4-interacting protein 1, mitochondrial P. anubis 96.5 401

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pituitary gland; tonsil; stomach; uncharacterized tissue; brain; skin; pancreas; testis; eye; blood; thymus; prostate; lung; embryonic tissue; thyroid; connective tissue; intestine; liver; placenta; kidney; lymph node; cervix; ascites; lymph; mouth; bone; mixed; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q21
UniSTS entry: Chr 1 L30021
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC006399.2 Homo sapiens reticulon 4 interacting protein 1, mRNA (cDNA clone MGC:12934 IMAGE:4309263), complete cds PA
NM_032730.4 Homo sapiens reticulon 4 interacting protein 1 (RTN4IP1), nuclear gene encoding mitochondrial protein, mRNA P
AF439711.1 Homo sapiens NOGO-interacting mitochondrial protein short isoform mRNA, complete cds, alternatively spliced; nuclear gene for mitochondrial product P
AY063761.1 Homo sapiens NOGO-interacting mitochondrial protein mRNA, complete cds P
AK313962.1 Homo sapiens cDNA, FLJ94608, Homo sapiens reticulon 4 interacting protein 1 (RTN4IP1), mRNA P
AK095207.1 Homo sapiens cDNA FLJ37888 fis, clone BRTHA2000474 P

EST sequences (10 of 99) [Show all sequences]

BX108883.1 Clone IMAGp998O195262_;_IMAGE:2132586 lymph node A
CB132294.1 Clone L11SNU354s1-1-H05 liver 5' read P
CB143318.1 Clone L11SNU354s1-11-E06 liver 5' read
AI309954.1 Clone IMAGE:1914004 kidney 3' read PA
AI434133.1 Clone IMAGE:2132586 lymph node 3' read A
AI474619.1 Clone IMAGE:2160076 kidney 3' read PA
AI760971.1 Clone IMAGE:2398707 kidney 3' read A
AL037647.2 Clone DKFZp564M2172 brain 5' read P
CB986318.1 Clone IMAGE:30329777 mixed 5' read P
CD105442.1 Clone IMAGE:30364515 pituitary gland 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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