> Chromosome 5 open reading frame 20 (C5orf20)
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UGID:154073     UniGene Hs.152477     Homo sapiens (human)   C5orf20 Order cDNA clone, Links
Chromosome 5 open reading frame 20 (C5orf20)

Human protein-coding gene C5orf20. Represented by 8 ESTs from 7 cDNA libraries. Corresponds to reference sequence NM_130848.2. [UniGene 154073 - Hs.152477]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_570900.1 C5orf20 gene product H. sapiens 100.0 243
Other hits (SpeciesId(%)Len(aa)
XP_003954540.1 PREDICTED: LOW QUALITY PROTEIN: dendritic cell nuclear protein 1-like P. troglodytes 96.0 246
XP_003919697.1 PREDICTED: LOW QUALITY PROTEIN: dendritic cell nuclear protein 1 P. anubis 86.3 240

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: heart; mixed; thymus; bone marrow; lung; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31.1
UniSTS entry: Chr 5 RH93048
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC069610.1 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone MGC:97013 IMAGE:7262222), complete cds P
BC069608.1 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone MGC:97001 IMAGE:7262210), complete cds P
BC074832.2 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone MGC:103933 IMAGE:30915326), complete cds P
BC074831.2 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone MGC:104093 IMAGE:30915544), complete cds P
BC117158.1 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone IMAGE:40125709) P
BC117156.1 Homo sapiens chromosome 5 open reading frame 20, mRNA (cDNA clone IMAGE:40125707) P
NM_130848.2 Homo sapiens chromosome 5 open reading frame 20 (C5orf20), mRNA PA
AB074498.1 Homo sapiens mRNA for DCNP1, complete cds PA

EST sequences (8)

AI141949.1 Clone IMAGE:1693482 heart 3' read
BX114721.1 Clone IMAGp998G194300_;_IMAGE:1693482 heart
AI673027.1 Clone IMAGE:2345401 thymus 3' read A
AW136257.1 Clone IMAGE:2715413 mixed 3' read A
AJ715236.1 Clone LKPD04454 bone marrow
BF358185.1 lung P
EL736239.1 mixed 5' read P
AA342611.1 spleen 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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