> Cryptochrome 1 (photolyase-like) (CRY1)
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UGID:153981     UniGene Hs.151573     Homo sapiens (human)   CRY1 Order cDNA clone, Links
Cryptochrome 1 (photolyase-like) (CRY1)

Human protein-coding gene CRY1. Represented by 211 ESTs from 106 cDNA libraries. Corresponds to reference sequence NM_004075.4. [UniGene 153981 - Hs.151573]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_509339.2 PREDICTED: cryptochrome-1 P. troglodytes 100.0 585
NP_004066.1 CRY1 gene product H. sapiens 100.0 585
XP_001100653.1 PREDICTED: cryptochrome-1-like M. mulatta 99.8 585
XP_003907145.1 PREDICTED: cryptochrome-1 P. anubis 99.8 585
NP_031797.1 Cry1 gene product M. musculus 98.7 605
NP_001081129.1 cryptochrome 1 (photolyase-like) X. laevis 95.1 615
NP_001070765.1 cryptochrome 1a isoform 1 D. rerio 92.6 618
NP_477188.1 (6-4)-photolyase, isoform B D. melanogaster 61.9 491
XP_001698054.1 cryptochrome photoreceptor C. reinhardtii 59.2 527
NP_566520.1 (6-4)DNA photolyase A. thaliana 58.9 504
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
XP_003126127.1 PREDICTED: cryptochrome-1 S. scrofa 99.5 587
XP_862753.1 PREDICTED: cryptochrome-1 isoform 2 C. lupus familiaris 99.5 586

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; stomach; liver; uterus; mixed; embryonic tissue; placenta; eye; intestine; skin; lung; uncharacterized tissue; larynx; kidney; vascular; esophagus; thymus; muscle; connective tissue; mouth; bone; bladder; prostate; salivary gland; ovary; parathyroid; pancreas; blood; lymph node; mammary gland; heart; spleen; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q23-q24.1
UniSTS entry: Chr 12 RH93858
UniSTS entry: Chr 12 RH79737
UniSTS entry: AB074458
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_004075.4 Homo sapiens cryptochrome 1 (photolyase-like) (CRY1), mRNA PA
AK131279.1 Homo sapiens cDNA FLJ16226 fis, clone FCBBF1000509, highly similar to Homo sapiens mRNA for photolyase P
D83702.1 Homo sapiens mRNA for photolyase, complete cds PA
AK290552.1 Homo sapiens cDNA FLJ76110 complete cds, highly similar to Homo sapiens cryptochrome 1 (CRY1), mRNA P
AK098615.1 Homo sapiens cDNA FLJ25749 fis, clone TST06111, highly similar to Homo sapiens mRNA for photolyase P
BC030519.1 Homo sapiens cryptochrome 1 (photolyase-like), mRNA (cDNA clone MGC:40475 IMAGE:5169081), complete cds PA
BC017466.1 Homo sapiens cryptochrome 1 (photolyase-like), mRNA (cDNA clone IMAGE:3907069) PA
D84657.1 Homo sapiens mRNA for photolyase homolog, complete cds P

EST sequences (10 of 211) [Show all sequences]

AA905519.1 Clone IMAGE:1506979 mixed 3' read A
AI023573.1 Clone IMAGE:1642778 testis 3' read A
R19031.1 Clone IMAGE:33049 brain 5' read P
AI042584.1 Clone IMAGE:1665829 skin 3' read PA
BX105075.1 Clone IMAGp998G24575_;_IMAGE:263087 skin P
AI246115.1 Clone IMAGE:1967020 lymph node 3' read A
CB215584.1 Clone IMAGE:5937186 uterus 5' read P
AI439465.1 Clone IMAGE:2140575 stomach 3' read A
R44018.1 Clone IMAGE:33049 brain 3' read A
AI797232.1 Clone IMAGE:2347957 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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