> Cyclin-dependent kinase 9 (CDK9)
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UGID:153739     UniGene Hs.150423     Homo sapiens (human)   CDK9 Order cDNA clone, Links
Cyclin-dependent kinase 9 (CDK9)

Human protein-coding gene CDK9. Represented by 236 ESTs from 144 cDNA libraries. Corresponds to reference sequence NM_001261.3. [UniGene 153739 - Hs.150423]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001094626.1 PREDICTED: cell division protein kinase 9 isoform 2 M. mulatta 100.0 371
XP_003911963.1 PREDICTED: cyclin-dependent kinase 9 P. anubis 100.0 371
XP_520277.2 PREDICTED: cyclin-dependent kinase 9 isoform 2 P. troglodytes 100.0 371
NP_001252.1 CDK9 gene product H. sapiens 100.0 371
NP_001159516.1 CDK9 gene product S. scrofa 100.0 371
NP_570930.1 Cdk9 gene product M. musculus 99.7 371
NP_001007744.1 Cdk9 gene product R. norvegicus 99.7 371
NP_001014935.2 CDK9 gene product B. taurus 99.7 371
NP_001090029.1 cyclin-dependent kinase 9-A X. laevis 94.4 375
NP_997756.1 cdk9 gene product D. rerio 94.4 390
NP_477226.2 Cyclin-dependent kinase 9 D. melanogaster 80.0 391
NP_492906.2 Protein CDK-9, isoform b C. elegans 61.3 452
XP_001694199.1 cyclin dependent kinase C. reinhardtii 53.8 305
NP_196589.1 cyclin-dependent kinase C-1 A. thaliana 51.5 344
NP_012783.1 Ctk1p S. cerevisiae 47.4 228
XP_958274.1 negative regulator of the PHO system N. crassa 45.0 200
Other hits (2 of 59) [Show all]SpeciesId(%)Len(aa)
XP_003639361.1 PREDICTED: cyclin-dependent kinase 9-like C. lupus familiaris 99.5 371
XP_004007216.1 PREDICTED: cyclin-dependent kinase 9 O. aries 97.7 384

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; mixed; placenta; embryonic tissue; kidney; intestine; uterus; cervix; lung; thymus; pancreas; skin; prostate; thyroid; pharynx; liver; testis; heart; eye; ovary; mammary gland; lymph node; stomach; nerve; amniotic fluid; bladder; bone; esophagus; parathyroid; ascites; muscle; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.1
UniSTS entry: Chr 9 D9S2040
UniSTS entry: Chr 9 WI-19919 [Map Viewer]
UniSTS entry: Chr 9 STS-L25676 [Map Viewer]
UniSTS entry: Chr 9 WI-15190 [Map Viewer]
UniSTS entry: Chr 9 CDK9_3250.2
UniSTS entry: Chr 9 SHGC-33502 [Map Viewer]
UniSTS entry: Chr 9 RH16566
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_001261.3 Homo sapiens cyclin-dependent kinase 9 (CDK9), mRNA P
BT019903.1 Homo sapiens cyclin-dependent kinase 9 (CDC2-related kinase) mRNA, complete cds P
BC001968.1 Homo sapiens cyclin-dependent kinase 9, mRNA (cDNA clone MGC:5166 IMAGE:3460767), complete cds PA
AK313828.1 Homo sapiens cDNA, FLJ94450, highly similar to Homo sapiens cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9), mRNA P
AB451421.1 Homo sapiens CDK9 mRNA for cyclin-dependent kinase 9, partial cds, clone: FLJ08130AAAF P
AB451289.1 Homo sapiens CDK9 mRNA for cyclin-dependent kinase 9, complete cds, clone: FLJ08130AAAN P
X80230.1 H.sapiens mRNA (clone C-2k) mRNA for serine/threonine protein kinase PA
L25676.1 Homo sapiens CDC2-related kinase (PITALRE) mRNA, complete cds P

EST sequences (10 of 236) [Show all sequences]

AA969125.1 Clone IMAGE:1580235 mixed 3' read
AI004271.1 Clone IMAGE:1625983 mixed 3' read A
AI040910.1 Clone IMAGE:1647954 parathyroid 3' read P
AI076591.1 Clone IMAGE:1675651 mixed 3' read A
BX117550.1 Clone IMAGp998O03735_;_IMAGE:324698 skin P
AI222414.1 Clone IMAGE:1843718 mixed 3' read P
AI336468.1 Clone IMAGE:1913010 intestine 3' read A
AI346566.1 Clone IMAGE:1926554 intestine 3' read A
AI351075.1 Clone IMAGE:1948360 uncharacterized tissue 3' read A
AI425062.1 Clone IMAGE:2112260 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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