> Acyl-CoA synthetase long-chain family member 6 (ACSL6)
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UGID:133359     UniGene Hs.14945     Homo sapiens (human)   ACSL6 Order cDNA clone, Links
Acyl-CoA synthetase long-chain family member 6 (ACSL6)

Human protein-coding gene ACSL6. Represented by 196 ESTs from 63 cDNA libraries. EST representation biased toward fetus. Corresponds to 6 reference sequences (different isoforms). [UniGene 133359 - Hs.14945]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056071.2 ACSL6 gene product H. sapiens 100.0 721
NP_001028769.1 Acsl6 gene product M. musculus 93.2 721
XP_001920939.3 PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 6 D. rerio 80.0 629
NP_001079665.1 similar to fatty acid Coenzyme A ligase X. laevis 74.6 694
XP_001690836.1 predicted protein C. reinhardtii 61.5 161
NP_490744.1 Protein ACS-13 C. elegans 57.0 645
NP_730370.2 CG3961, isoform D D. melanogaster 56.4 638
NP_198112.2 long-chain acyl-CoA synthetase 7 A. thaliana 52.9 573
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_003310893.2 PREDICTED: long-chain-fatty-acid--CoA ligase 6 P. troglodytes 98.3 687
NP_001162503.1 long-chain-fatty-acid--CoA ligase 6 P. anubis 98.2 662

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; eye; intestine; lung; blood; adrenal gland; kidney; ovary; liver; uncharacterized tissue; muscle; connective tissue; bone; pineal gland; prostate; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31
UniSTS entry: Chr 5 HSC2DF112 [Map Viewer]
UniSTS entry: Chr 5 REN68234
UniSTS entry: Chr 5 RH66391
UniSTS entry: Chr 5 REN68219
UniSTS entry: Chr 5 REN68227
UniSTS entry: Chr 5 REN68230
UniSTS entry: Chr 5 REN68231
UniSTS entry: Chr 5 A006Y44
UniSTS entry: Chr 5 REN68225
UniSTS entry: Chr 5 SGC32042 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AB020644.1 Homo sapiens mRNA for KIAA0837 protein, partial cds P
BC047453.1 Homo sapiens acyl-CoA synthetase long-chain family member 6, mRNA (cDNA clone MGC:48352 IMAGE:5270879), complete cds PA
AK122702.1 Homo sapiens cDNA FLJ16173 fis, clone BRHIP2005010, highly similar to Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) P
NM_001009185.2 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 2, mRNA PA
AL390168.1 Homo sapiens mRNA; cDNA DKFZp547D104 (from clone DKFZp547D104) A
AF129166.1 Homo sapiens long-chain acyl-CoA synthetase 5 (LACS5) mRNA, complete cds PA
AF102845.1 Homo sapiens TEL-LACS fusion mRNA P
DQ083031.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 isoform e (ACSL6) mRNA, complete cds, alternatively spliced P
DQ083030.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 isoform d (ACSL6) mRNA, partial cds, alternatively spliced P
DQ655981.2 Homo sapiens clone Affy08246F12, mRNA sequence P
DQ655980.2 Homo sapiens clone Affy08246A12, mRNA sequence P
NM_015256.3 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 1, mRNA PA
AK314452.1 Homo sapiens cDNA, FLJ95253, highly similar to Homo sapiens acyl-CoA synthetase long-chain family member 6(ACSL6), mRNA P
AK294291.1 Homo sapiens cDNA FLJ55964 complete cds, highly similar to Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) PA
BC026161.1 Homo sapiens acyl-CoA synthetase long-chain family member 6, mRNA (cDNA clone MGC:26420 IMAGE:4830357), complete cds PA
NM_001205251.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 6, mRNA PA
NM_001205250.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 5, mRNA PA
NM_001205248.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 4, mRNA PA
NM_001205247.1 Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 3, mRNA PA

EST sequences (10 of 196) [Show all sequences]

R17684.1 Clone IMAGE:25293 brain 3' read A
R20295.1 Clone IMAGE:32816 brain 5' read
AI081721.1 Clone IMAGE:1653258 mixed 3' read
R22644.1 Clone IMAGE:31396 brain 5' read P
AI149964.1 Clone IMAGE:1752336 testis 3' read A
BX107280.1 Clone IMAGp998K20177_;_IMAGE:42928 brain A
AI084952.1 Clone IMAGE:1653704 mixed 3' read A
AI292152.1 Clone IMAGE:1895877 lung 3' read A
R38649.1 Clone IMAGE:23109 brain 3' read A
R52682.1 Clone IMAGE:41843 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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