> Histidine decarboxylase (HDC)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:131013     UniGene Hs.1481     Homo sapiens (human)   HDC Order cDNA clone, Links
Histidine decarboxylase (HDC)

Human protein-coding gene HDC. Represented by 47 ESTs from 24 cDNA libraries. Corresponds to reference sequence NM_002112.3. [UniGene 131013 - Hs.1481]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002103.2 HDC gene product H. sapiens 100.0 661
XP_510396.1 PREDICTED: histidine decarboxylase isoform 2 P. troglodytes 99.8 661
NP_032256.3 Hdc gene product M. musculus 92.0 661
NP_001096063.1 hdc gene product D. rerio 74.5 537
NP_001104211.1 dopa decarboxylase (aromatic L-amino acid decarboxylase) X. laevis 59.5 476
NP_523600.5 dopa decarboxylase, isoform D D. melanogaster 55.8 468
NP_495744.1 Protein TDC-1, isoform a C. elegans 52.4 519
NP_001190862.1 tyrosine decarboxylase A. thaliana 47.8 414
XP_001690025.1 aromatic-aminoacid decarboxylase C. reinhardtii 47.7 193
XP_961903.1 hypothetical protein NCU08275 N. crassa 45.6 158
Other hits (2 of 48) [Show all]SpeciesId(%)Len(aa)
XP_001114184.1 PREDICTED: histidine decarboxylase isoform 2 M. mulatta 99.2 661
XP_003900973.1 PREDICTED: histidine decarboxylase P. anubis 99.2 628

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; mixed; mammary gland; prostate; bone marrow; brain; adipose tissue; uncharacterized tissue; lung; intestine; spleen; stomach; thymus; testis; pharynx; uterus; placenta
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q21-q22
UniSTS entry: Chr 15 RH69151
UniSTS entry: Chr 15 D15S1162 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_002112.3 Homo sapiens histidine decarboxylase (HDC), mRNA P
M60445.1 Human histidine decarboxylase (HDC) mRNA, complete cds P
AK027221.1 Homo sapiens cDNA: FLJ23568 fis, clone LNG11092, highly similar to HUMHDC Human histidine decarboxylase (HDC) mRNA PA
BC130527.1 Homo sapiens histidine decarboxylase, mRNA (cDNA clone MGC:163399 IMAGE:40146558), complete cds P
AK308833.1 Homo sapiens cDNA, FLJ98874 P
AK311072.1 Homo sapiens cDNA, FLJ18114 P
AK310479.1 Homo sapiens cDNA, FLJ17521 P
X54297.1 Human mRNA for histidine decarboxylase (EC 4.1.1.22) P
D10088.1 Homo sapiens HisCD alternatively spliced mRNA, insertion sequence region
BC144173.1 Homo sapiens histidine decarboxylase, mRNA (cDNA clone MGC:177710 IMAGE:9052693), complete cds P

EST sequences (10 of 47) [Show all sequences]

BX107942.1 Clone IMAGp998A205538_;_IMAGE:2238235 uncharacterized tissue P
AI695885.1 Clone IMAGE:2238235 uncharacterized tissue 3' read A
AL041199.1 Clone DKFZp434I1516 testis 5' read
CB266975.1 adipose tissue 5' read
CD703337.1 pharynx P
AW198195.1 Clone IMAGE:2705662 pancreas 3' read A
AW204882.1 Clone IMAGE:2719503 mixed 3' read A
BP315792.1 Clone OFR09396 mammary gland 5' read P
DR006262.1 Clone TC118839 prostate 5' read P
AV758763.1 Clone BMFAQD01 bone marrow 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help