> ADP-ribosylation factor-like 13A (ARL13A)
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UGID:152483     UniGene Hs.147237     Homo sapiens (human)   ARL13A Order cDNA clone, Links
ADP-ribosylation factor-like 13A (ARL13A)

Human protein-coding gene ARL13A. Represented by 19 ESTs from 9 cDNA libraries. EST representation biased toward soft tissue/muscle tissue tumor. Corresponds to 3 reference sequences (different isoforms). [UniGene 152483 - Hs.147237]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001013008.2 ARL13A gene product H. sapiens 100.0 289
XP_003317596.1 PREDICTED: ADP-ribosylation factor-like 13A isoform 1 P. troglodytes 99.7 289
NP_083223.1 Arl13a gene product M. musculus 64.1 345
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_001090836.2 PREDICTED: ADP-ribosylation factor-like 13A M. mulatta 97.9 289
XP_003918038.1 PREDICTED: ADP-ribosylation factor-like protein 13A P. anubis 92.4 301

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: soft tissue/muscle tissue tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; vascular; connective tissue; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_001012990.3 Homo sapiens ADP-ribosylation factor-like 13A (ARL13A), transcript variant 2, mRNA PA
BC140808.1 Homo sapiens ADP-ribosylation factor-like 13A, mRNA (cDNA clone MGC:176485 IMAGE:9021676), complete cds P
AK301813.1 Homo sapiens cDNA FLJ59062 complete cds, highly similar to Homo sapiens ADP-ribosylation factor-like 13 (ARL13), mRNA P
BC144603.1 Homo sapiens ADP-ribosylation factor-like 13A, mRNA (cDNA clone MGC:178151 IMAGE:9053134), complete cds P
NM_001162491.1 Homo sapiens ADP-ribosylation factor-like 13A (ARL13A), transcript variant 3, mRNA PA
NM_001162490.1 Homo sapiens ADP-ribosylation factor-like 13A (ARL13A), transcript variant 1, mRNA PA

EST sequences (10 of 19) [Show all sequences]

AI205921.1 Clone IMAGE:1754409 testis 3' read A
BX119507.1 Clone IMAGp998B104459_;_IMAGE:1754409 testis P
CD300373.1 Clone IMAGE:30389522 testis 5' read P
AW118931.1 Clone IMAGE:2605664 mixed 3' read A
CN263513.1 embryonic tissue 5' read
DA886349.1 Clone PUAEN2006649 vascular 5' read
DY654679.1 Clone ucsc5_1.3.1.L1.1.F06 mixed P
DY654680.1 Clone ucsc5_1.3.1.L1.1.F06 mixed P
DY655123.1 Clone ucsc5_1.7.1.L1.1.E01 mixed P
DY655124.1 Clone ucsc5_1.7.1.L1.1.E01 mixed P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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