> Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:152138     UniGene Hs.146393     Homo sapiens (human)   HERPUD1 Order cDNA clone, Links
Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1)

Human protein-coding gene HERPUD1. Represented by 1075 ESTs from 380 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 152138 - Hs.146393]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001141795.2 PREDICTED: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 isoform 12 P. troglodytes 100.0 450
NP_055500.1 HERPUD1 gene product H. sapiens 100.0 390
NP_071726.1 Herpud1 gene product M. musculus 93.6 390
NP_001082657.1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 X. laevis 58.9 357
NP_001020708.1 herpud1 gene product D. rerio 53.2 401
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001095112.2 PREDICTED: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 isoform 7 M. mulatta 98.9 448
XP_003916969.1 PREDICTED: homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform 1 P. anubis 98.9 448

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; placenta; prostate; intestine; kidney; eye; mixed; skin; connective tissue; amniotic fluid; stomach; uncharacterized tissue; uterus; testis; salivary gland; bone; tonsil; liver; pancreas; cervix; heart; mammary gland; ganglia; trachea; embryonic tissue; blood; mouth; muscle; spleen; bladder; ovary; adrenal gland; lymph node; pituitary gland; pharynx; esophagus; thymus; bone marrow; parathyroid; thyroid; vascular; lymph; ascites; umbilical cord; nerve; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q13
UniSTS entry: Chr 16 SHGC-61031
UniSTS entry: Chr 16 RH25263
UniSTS entry: Chr 16 D16S3200
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

CR457116.1 Homo sapiens full open reading frame cDNA clone RZPDo834F1012D for gene HERPUD1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1; complete cds, incl. stopcodon P
NM_014685.3 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1), transcript variant 1, mRNA PA
NM_001010989.2 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1), transcript variant 2, mRNA PA
AB034989.1 Homo sapiens HERPUD1 mRNA for stress protein Herp, complete cds P
AK223233.1 Homo sapiens mRNA for homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 variant, clone: STM01396 PA
AF217990.1 Homo sapiens clone PP1722 unknown mRNA PA
BC000086.1 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone MGC:2246 IMAGE:3504515), complete cds PA
BC008320.1 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone MGC:15680 IMAGE:3350209), complete cds PA
DQ837586.1 Homo sapiens homocysteine-inducible endoplasmic reticulum stress-inducible ubiquitin-like domain member 1 protein (HERPUD1) mRNA, complete cds, alternatively spliced P
BC009739.1 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone MGC:14571 IMAGE:4095997), complete cds PA
AK292088.1 Homo sapiens cDNA FLJ78602 complete cds, highly similar to Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1), transcript variant 1, mRNA P
AK291565.1 Homo sapiens cDNA FLJ76864 complete cds, highly similar to Homo sapiens homocysteine-inducible, endoplasmic reticulumstress-inducible, ubiquitin-like domain member 1 (HERPUD1), mRNA P
D14695.1 Homo sapiens KIAA0025 mRNA, complete cds P
BC032673.1 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone MGC:45131 IMAGE:5575914), complete cds PA
AK304800.1 Homo sapiens cDNA FLJ61088 complete cds, highly similar to Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein P
AK302167.1 Homo sapiens cDNA FLJ54200 complete cds, highly similar to Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1protein P
NM_001272103.1 Homo sapiens homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (HERPUD1), transcript variant 4, mRNA A
AF055001.1 Homo sapiens clone 24560 unknown mRNA, complete cds PA
AF055003.1 Homo sapiens clone 24414 unknown mRNA, partial cds PA

EST sequences (10 of 1075) [Show all sequences]

AA866058.1 Clone IMAGE:1470307 uncharacterized tissue 3' read A
R14436.1 Clone IMAGE:28918 brain 5' read P
AA970453.1 Clone IMAGE:1580691 mixed 3' read A
AA970728.1 Clone IMAGE:1573103 kidney 3' read A
AA973268.1 Clone IMAGE:1536918 kidney 3' read
AA977391.1 Clone IMAGE:1589045 kidney 3' read A
AA989492.1 Clone IMAGE:1606251 kidney 3' read A
AA989494.1 Clone IMAGE:1606255 kidney 3' read A
AA910957.1 Clone IMAGE:1520807 kidney 3' read A
R18335.1 Clone IMAGE:30476 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help