Calcium binding protein 4 (CABP4)

Restricted Expression:

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

eye; liver; connective tissue; mammary gland; uncharacterized tissue; muscle; placenta; lung; mixed; prostate; uterus; brain; kidney

NCBI

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UGID:151155 UniGene Hs.143036 Homo sapiens (human) CABP4

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Calcium binding protein 4 (CABP4)

Human protein-coding gene CABP4. Represented by 31 ESTs from 17 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_145200.3. [UniGene 151155 - Hs.143036]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_660201.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CABP4 gene product	H. sapiens	100.0	274
XP_003313224.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: calcium-binding protein 4	P. troglodytes	99.6	274
NP_653115.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cabp4 gene product	M. musculus	84.7	261
XP_001338361.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: calcium-binding protein 4	D. rerio	54.9	224
Other hits (2 of 19) [Show all]		Species	Id(%)	Len(aa)
XP_003909515.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: calcium-binding protein 4	P. anubis	97.5	274
XP_001105891.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: calcium-binding protein 4 isoform 2	M. mulatta	96.0	274

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
Map position:	11q13.2
UniSTS entry:	Chr 1	GDB:434012
UniSTS entry:	Chr 1	PMC156606P2
UniSTS entry:	Chr 1	D8S2279
UniSTS entry:	Chr 11	D11S2072

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AY039217.1	Homo sapiens calcium-binding protein CaBP4 mRNA, complete cds	P
NM_145200.3	Homo sapiens calcium binding protein 4 (CABP4), mRNA	PA
BC033167.1	Homo sapiens calcium binding protein 4, mRNA (cDNA clone MGC:45795 IMAGE:4549347), complete cds	PA

EST sequences (10 of 31) [Show all sequences]

AI129455.1	Clone IMAGE:1712464	uterus	3' read	A
BX115851.1	Clone IMAGp998J16412_;_IMAGE:210927	mixed
AI659884.1	Clone IMAGE:2249770	prostate	3' read
BX283598.1	Clone IMAGp958J041240_;_IMAGE:4549347	lung
BX510148.1	Clone DKFZp686G1996	muscle	5' read	P
BX954839.1	Clone DKFZp781A2359	uncharacterized tissue	5' read	P
BE070394.1		mammary gland
H69788.1	Clone IMAGE:210927	mixed	3' read
H70963.1	Clone IMAGE:210927	mixed	5' read
DB334861.1	Clone SYNOV2009188	connective tissue	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria