> SIN3 transcription regulator homolog B (yeast) (SIN3B)
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UGID:133225     UniGene Hs.13999     Homo sapiens (human)   SIN3B Links
SIN3 transcription regulator homolog B (yeast) (SIN3B)

Human protein-coding gene SIN3B. Represented by 338 ESTs from 181 cDNA libraries. Corresponds to reference sequence NM_015260.2. [UniGene 133225 - Hs.13999]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056075.1 SIN3B gene product H. sapiens 100.0 1161
XP_003915165.1 PREDICTED: paired amphipathic helix protein Sin3b P. anubis 99.9 1161
XP_512485.2 PREDICTED: paired amphipathic helix protein Sin3b P. troglodytes 99.9 1158
NP_033214.2 Sin3b gene product M. musculus 95.4 1097
NP_001090601.1 SIN3 transcription regulator homolog B X. laevis 82.5 1123
NP_001038410.1 sin3b gene product D. rerio 77.0 1158
NP_725189.1 Sin3A, isoform D D. melanogaster 58.8 774
NP_014639.1 Sin3p S. cerevisiae 46.4 179
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_002801166.1 PREDICTED: paired amphipathic helix protein Sin3b-like M. mulatta 98.9 1136
XP_003123526.1 PREDICTED: paired amphipathic helix protein Sin3b S. scrofa 98.0 1120

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; mixed; embryonic tissue; prostate; mammary gland; thymus; uncharacterized tissue; uterus; cervix; intestine; eye; lung; skin; lymph node; liver; kidney; bladder; epididymis; connective tissue; heart; mouth; ovary; tonsil; trachea; blood; pituitary gland; lymph; ascites; pancreas; esophagus; muscle; spleen; nerve; bone; ganglia; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.11
UniSTS entry: Chr 19 A005U36 [Map Viewer]
UniSTS entry: Chr 1 GDB:335751
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AB014600.2 Homo sapiens mRNA for KIAA0700 protein, partial cds P
BC063531.1 Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA (cDNA clone IMAGE:4417458), complete cds PA
AK001633.1 Homo sapiens cDNA FLJ10771 fis, clone NT2RP4000210, highly similar to Homo sapiens mRNA for KIAA0700 protein P
AY706204.1 Homo sapiens SIN3B long isoform (SIN3B) mRNA, complete cds, alternatively spliced P
NM_015260.2 Homo sapiens SIN3 transcription regulator homolog B (yeast) (SIN3B), mRNA PA
BC110821.1 Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA (cDNA clone IMAGE:5498101), complete cds PA
BC005113.1 Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA (cDNA clone IMAGE:4040380), partial cds PA
AK311023.1 Homo sapiens cDNA, FLJ18065 P
BC025026.1 Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA (cDNA clone IMAGE:3923074), partial cds PA
AK295618.1 Homo sapiens cDNA FLJ59305 complete cds, highly similar to Paired amphipathic helix protein Sin3b P

EST sequences (10 of 338) [Show all sequences]

AA975322.1 Clone IMAGE:1558889 lung 3' read A
AI017713.1 Clone IMAGE:1638610 testis 3' read A
AI076046.1 Clone IMAGE:1670226 brain 3' read A
AI088319.1 Clone IMAGE:1690865 mixed 3' read A
R21541.1 Clone IMAGE:130224 placenta 3' read A
R21650.1 Clone IMAGE:130224 placenta 5' read
AI141512.1 Clone IMAGE:1638325 testis 3' read A
AI143263.1 Clone IMAGE:1706081 heart 3' read A
CB053510.1 Clone IMAGE:3291071 uncharacterized tissue 3' read A
CB053511.1 Clone IMAGE:3291071 uncharacterized tissue 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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